1deec8e824a240e32fd4eec7204e658a *DESCRIPTION
69312e7bd447776eb9e3899096bcb0e6 *NAMESPACE
eb15dff964311c6c9dd49d7c3a6f10c8 *R/0.generics.R
e0ecd18aad88878412b0c00c57d7c7ce *R/1.ph.R
24c8f61bfe34f276dafe784bd7106e92 *R/2.iph.R
3d8d0af48ed543743bd87bcc19bb93c0 *R/2b.iph_regression.R
856942c2575aec07d03c7a2843d40cb6 *R/3.mph.R
2c1dabd69e6216908b40d132130007fd *R/3b.miph.R
607c9263525255ec916e7575afcd862b *R/3b.miph.nnet.R
c924e49ee1c8916f2d69681f5fc96e0c *R/4.MPHstar.R
c6af9d134662807e4e1eff5a0c4dc681 *R/4b.bivph.R
d5a2f2e84313f83e99ebfcd60c36a43a *R/5.phMoE.R
f70ffc3dee9f968afa02ac44612a0f2b *R/6.sph.R
6e31b946fb9f3f19bdc0d9b69bbe7cc6 *R/7.dph.R
f094c83c9dbb8a746f76fcf358eb03c2 *R/RcppExports.R
a5472cd9c40affb90bd6ad43eec6d16f *R/matrixdist-package.R
74c7e3955aeed9b67b22350ff024a0fd *README.md
65f802cb4081a421fbf51ee6e7e8cdc9 *man/EM_step_mPH_rc.Rd
1ed0d7012776579a771ec1e09608fd85 *man/EMstep_MoE_PADE.Rd
20ec1879893a99791e56a1fceb917c32 *man/EMstep_PADE.Rd
46d8020ceb8a09403c31504d38b12811 *man/EMstep_RK.Rd
ab0fdb5ac804ad6c1e1252b154f86f76 *man/EMstep_UNI.Rd
f1a12ad04f9f866d1281aec74dc27d33 *man/EMstep_bivph.Rd
cab7e4b7adc43aeffa558c655385d3a2 *man/EMstep_dph.Rd
d65005a78d2fd89772408d325756129a *man/EMstep_dph_MoE.Rd
468cda72f5cf7a241c3634a0f8e0ae64 *man/Fisher-sph-method.Rd
47736896c0cffce4359fc0bd4159f03f *man/Fisher.Rd
3b95ea568e8d3831b6fc3f8fce865642 *man/LRT-ph-ph-method.Rd
8fb0d51399bf0acd7dcca59319b8bb8a *man/LRT.Rd
8de3418861a9cb4338e469388b1dc05a *man/MPHstar-class.Rd
71df370a2a60b22adb930e1803ff03f7 *man/MPHstar.Rd
136fe0cba8e83cbf4ee34405b3848291 *man/MPHstar_EMstep_UNI.Rd
440d17d5bf60b80e41dc89600aa67a7b *man/MPHstar_data_aggregation.Rd
f3db71181c8b4948a542025134a90298 *man/MoE-dph-method.Rd
7f9ee1d3ce6b0c7d622e81123b0b0030 *man/MoE-ph-method.Rd
03a32208054edc5fda696f0d34b1eb95 *man/MoE.Rd
ff75554b35f82200b0cbb541490a8d46 *man/Q_null_null.Rd
34bbb23d87dfa067a82a2ec0a4d5f787 *man/Q_null_pos.Rd
1a806f9a6498234db9ffc817592ce332 *man/Q_pos_null.Rd
1726e34d566c34a0f6d1cc52098eeec5 *man/Q_pos_pos.Rd
0f6fda22c9b09f34be4146ffc48ff13e *man/TVR-MPHstar-method.Rd
a345f16aa215662d1bbae0743faa351d *man/TVR.Rd
e98a3f21ae8145cf93f72518e44b39c2 *man/a_rungekutta.Rd
30fb1d4eebf0c2a7d546620449972bd8 *man/bivph-class.Rd
3bd31ad427b968f7f13a47902c860f71 *man/bivph.Rd
a965f8cf4b2b56690cabf122bb1b72e4 *man/bivph_density.Rd
c215b5f1408475c234e4b7be533b8a3c *man/bivph_tail.Rd
843ae7bc08057ea1542f1d832628adf5 *man/cdf-dph-method.Rd
4c2e9ed68a86be4a9f2c4ba2fc8468b4 *man/cdf-iph-method.Rd
1ed951b4a716be360c6219a503795cb7 *man/cdf-miph-method.Rd
b22911bd8b7b17b9a75125e251b11161 *man/cdf-mph-method.Rd
30fcf5eeecc9ad77e8fefa22506f2c36 *man/cdf-ph-method.Rd
590819f514f0d7e56e3bd04db19bbbb2 *man/cdf.Rd
1781e645abddd61f1c4dea569f944cb2 *man/clone_matrix.Rd
2b898aa88d1c719de79c209f5f618131 *man/clone_vector.Rd
a4f2298dd1b3181db47da5840486a910 *man/coef-bivph-method.Rd
e5534163cb899c725e1294e78cd505fd *man/coef-dph-method.Rd
8d52cad58802bb11884f4a3192561c7b *man/coef-iph-method.Rd
769bb5a5a67ee32516bff968a398451b *man/coef-ph-method.Rd
f787b70498f780afa91be8dadf590c05 *man/coef-sph-method.Rd
71eef14b659e5abab5c02612a676b98d *man/cumulate_matrix.Rd
fac7b770e60a6179fa734279bdc09e2f *man/cumulate_vector.Rd
02093f276f6362b12f6f6081dfcdf7ea *man/default_step_length.Rd
8e5158bc35fcc8a22f889259259bd88d *man/dens-bivph-method.Rd
56427da3659429b0468de09fb750a4a7 *man/dens-dph-method.Rd
e2d52b9d693e2fa3ae6f3cf65d69db2c *man/dens-iph-method.Rd
1b7610de61229a9a18488d9658584f88 *man/dens-miph-method.Rd
2475da6fee89242488671c780c534b51 *man/dens-mph-method.Rd
80e6c9c1fd082bd179c335539f52c438 *man/dens-ph-method.Rd
4bee0fc84b06c445d859941ab73fd0d0 *man/dens.Rd
79fbc7a1e710a03846130970a27c2917 *man/dph-class.Rd
69e69ae63b94be90959255a6db3cb2c2 *man/dph.Rd
8b48b038eb8dab979dd12559dcc10282 *man/dphcdf.Rd
20733332e6bdd02e5b163696cd2afb1a *man/dphdensity.Rd
1db8577d5ebebf0328797f2eb94cc746 *man/embedded_mc.Rd
159fee08f6e21dc0538d33bb3a3b4cb2 *man/evaluate-sph-method.Rd
395dfdd4a2b4f88532cc84341f781a8e *man/evaluate.Rd
157c708ac0090ad5eb5865d3d9acde51 *man/expm_terms.Rd
c656f107e40a425c7b3910f0d1835d5c *man/expmat.Rd
83a1520428c4768c5dc1177a9965337d *man/find_n.Rd
597e8ce44c47d18b3078884710fe5c20 *man/find_weight.Rd
a65d1b6bbe673a2d1f3fc756edd4bc22 *man/fit-MPHstar-method.Rd
49a80e177c658ceffdec9fe90ac9d657 *man/fit-dph-method.Rd
01a217dbd2443ba9e91a4224e241e21a *man/fit-mph-method.Rd
4ad446bf7f697e85dab18045da28f4c9 *man/fit-ph-method.Rd
7a2c17aec2ec3c9240b61d2e2dc4378c *man/fit.Rd
7e2d75720100aa2a34c67d1d944431bc *man/haz-ph-method.Rd
547daeb8ff693505d1be25d1a4c2846f *man/haz.Rd
b533081ea2dab2e54fe7f8db16cac712 *man/inf_norm.Rd
69b742cf8a094448e67f9c1d61c13d4f *man/initial_state.Rd
779c3a423bb467f492380963dc94a098 *man/iph-class.Rd
66f2d02e01824ec9a3cf9af6ae058a34 *man/iph.Rd
01b5077b41558cfded4fb7d18b81064d *man/logLik-ph-method.Rd
e2a90352e6e64f3c5c2201152e0b259a *man/logLikelihoodDPH.Rd
c01bab6cf30c2bac134075287a0908b2 *man/logLikelihoodDPH_MoE.Rd
f48acb708111ec2c7dda7e044813e6f3 *man/logLikelihoodMgev_PADE.Rd
36e34764f85fe4079bf32b9860c385ee *man/logLikelihoodMgev_RK.Rd
97566b3680c17fa444c270bcce2efbeb *man/logLikelihoodMgev_UNI.Rd
17a0629079ffeae692bcaba3a7b1240e *man/logLikelihoodMgompertz_PADE.Rd
ded1085824fe07d4434232d05b482584 *man/logLikelihoodMgompertz_PADEs.Rd
d559954adb0915607be85f49f22b32d7 *man/logLikelihoodMgompertz_RK.Rd
1fdb054dab9bd35befd0fe03b8a1f511 *man/logLikelihoodMgompertz_RKs.Rd
99d512e135177999a3b707aaeb7d8230 *man/logLikelihoodMgompertz_UNI.Rd
d6316ea5046ed02889bf02ee22d186e3 *man/logLikelihoodMgompertz_UNIs.Rd
255871aca2568b62132ab070e7a71572 *man/logLikelihoodMloglogistic_PADE.Rd
fce05b49c4291a11c2813d56a876a67e *man/logLikelihoodMloglogistic_PADEs.Rd
2e0daf8a897206a2a858a8489846de95 *man/logLikelihoodMloglogistic_RK.Rd
930068b2d272dc0bf9f65d1191f892f7 *man/logLikelihoodMloglogistic_RKs.Rd
afa2414713eba93ba24d290248ee1457 *man/logLikelihoodMloglogistic_UNI.Rd
22b7d5d785316db04463c1d08a2d29e7 *man/logLikelihoodMloglogistic_UNIs.Rd
0e7a2c3f621529d962f0cd1cd7735703 *man/logLikelihoodMlognormal_PADE.Rd
c929c8fd88d7ef285d134cc2ab870a28 *man/logLikelihoodMlognormal_PADEs.Rd
890861e3410dd975d0473506b6aff319 *man/logLikelihoodMlognormal_RK.Rd
d02526ff9cbd6514e0d2ef17485adc6d *man/logLikelihoodMlognormal_RKs.Rd
b9176d1cbb60dc8841ce7d20e640f5f5 *man/logLikelihoodMlognormal_UNI.Rd
40d4528035508eb830d2a3663acce653 *man/logLikelihoodMlognormal_UNIs.Rd
74d124a1762f68a6471d1154447a767e *man/logLikelihoodMpareto_PADE.Rd
554b863614c5d904cf15bf1239ab261a *man/logLikelihoodMpareto_PADEs.Rd
716abad420d6eb498400e1939f86c0e2 *man/logLikelihoodMpareto_RK.Rd
7a87c1e90030ad3f800cf79683adf437 *man/logLikelihoodMpareto_RKs.Rd
4d7ef80305dfbd3f4d48535806c72541 *man/logLikelihoodMpareto_UNI.Rd
1f4c30c805d939e641bb8fe3f0947ae0 *man/logLikelihoodMpareto_UNIs.Rd
fb7386a9b749dee31e7ef43abed63e5b *man/logLikelihoodMweibull_PADE.Rd
f3a1f1c6350b6351b1168f95e36317bf *man/logLikelihoodMweibull_PADEs.Rd
80460cda39b2badb18517bb2f026c46b *man/logLikelihoodMweibull_RK.Rd
62bb5e77df14e890a9173edc1589b10e *man/logLikelihoodMweibull_RKs.Rd
629e2773486ea0d60076212b1e7605ae *man/logLikelihoodMweibull_UNI.Rd
e9da6fe357d5538e62aadcc5a3448204 *man/logLikelihoodMweibull_UNIs.Rd
cf91a404873b5dba2c06f79872e0ec82 *man/logLikelihoodPH_MoE.Rd
4ae7188651f680f1007822f3c3a718f6 *man/logLikelihoodPH_PADE.Rd
545af529a8a92dd55d822746c734c5fc *man/logLikelihoodPH_PADEs.Rd
527cfb93f7c1ed85ed9294b1a10d33cb *man/logLikelihoodPH_RK.Rd
9ef6e2aaab0af168cfb1f2221a1e4a3b *man/logLikelihoodPH_RKs.Rd
cf38cdde27ebe48d09e1dee9ca5a8888 *man/logLikelihoodPH_UNI.Rd
442f51d66ae1a1c72ee9027bf0454c85 *man/logLikelihoodPH_UNIs.Rd
146a0791a7d1c202ca1e77e45a99333d *man/m_exp_sum.Rd
ee97398407b60f53f433f7bb56b79dea *man/marginal_expectation.Rd
3fd37c7636c60ca425bc685e7723e2af *man/matrix_exponential.Rd
b12a7dd0387d4eadb137ebf8ba5cefb1 *man/matrix_inverse.Rd
bc54cdc50c523ffefa29bd27742d1ca1 *man/matrix_power.Rd
70bcdb4b6735deb6c818726eafc75a96 *man/matrix_product.Rd
3e3200e72a855af9dd85dd71978a44fb *man/matrix_vanloan.Rd
6cb5e6d6b6dc114e19594722ec06140b *man/matrixdist-package.Rd
189d7c24071f8e094478e72114667caf *man/max_diagonal.Rd
8862646da7dee4401d23718e52888507 *man/maximum-dph-dph-method.Rd
6a7ed3f6f5149e97d103a9d65ce68661 *man/maximum-iph-iph-method.Rd
10f6f27447d4bac0e1deb2bf1334aff1 *man/maximum-ph-ph-method.Rd
820b1e8e923ddc644f5c5bd211c08253 *man/maximum.Rd
b1715a8d9cd0f5b6763f346a0e573beb *man/merge_matrices.Rd
d17ffead4e640ff2cad3dcc95ac88616 *man/mgevcdf.Rd
cc6c5baa04068b307dfb059b357ef134 *man/mgevden.Rd
5a50d6a9f7af0fdd0f37e6ea10121a9f *man/mgompertzcdf.Rd
b8f0008050b180f4d8c1da97c8e265a4 *man/mgompertzden.Rd
7aaf98c6d9ef2338473e35b43ed86b5d *man/minimum-dph-dph-method.Rd
3316cac418eddc1c1771c2c42be39c7f *man/minimum-iph-iph-method.Rd
37329e06e9c1a647531569179c7de7f1 *man/minimum-ph-ph-method.Rd
3ceb255c7314f287d8dd75a0f9170baf *man/minimum.Rd
e0749a6ee9ee409229ab68c4bc2f5e46 *man/miph-class.Rd
e260030820d3195e4c387e1e24b75be0 *man/miph.Rd
ce5611d3feaf063b87e05e4a7ad8703f *man/mloglogisticcdf.Rd
59369031227dc13dfbf41da1e69f0953 *man/mloglogisticden.Rd
712f4ae7aa6233ca0d5c4f6a7310b3e9 *man/mlognormalcdf.Rd
f0c3368186f6657da84766ba7772ee82 *man/mlognormalden.Rd
5320c7d2535baf0cffe3470b0593a24c *man/moment-bivph-method.Rd
d203e87e4db049d6f61326967253c54e *man/moment-dph-method.Rd
17c9ce491dcad40ffa628428dabb0dd9 *man/moment-ph-method.Rd
22353deca39bfe4d678f591600cbacfc *man/moment.Rd
0363c045ed48eca010657e567f3ebf23 *man/mparetocdf.Rd
5a6418c90d4e8eeaecf4e29fc449266b *man/mparetoden.Rd
f96289c79e69dcae27635e47d7ae5eca *man/mph-class.Rd
b1d1021d847b927b8c37c446eb51c8ce *man/mph.Rd
f132cd50c200880d52cc03917db4ceaf *man/mweibullcdf.Rd
5a6073c5af3d895454495da5b723590b *man/mweibullden.Rd
d9b4335ecf45a51e6d872ea5cce8f211 *man/n_null.Rd
74eda47f8fc6779b4e52fc18d2d8107e *man/n_pos.Rd
8c695534efd1209ee341e0cffaef2323 *man/new_exit_vec.Rd
7a0e9be2e6e1853c49b99e3fcffa19e5 *man/new_pi.Rd
04bc600d0b7db5708cea0b9dacd719eb *man/new_state.Rd
cced6d6fe4df9341259b2be73e116453 *man/new_subint_mat.Rd
04af20920eb2091d08bddca8d78cee4c *man/new_trans_exit.Rd
8178064739d3c22b9f75274c59e35eee *man/new_trans_mat.Rd
74d8087c84587f97b7d91db4c30e7bfa *man/nnet_fit-mph-method.Rd
9aa1cc2553b2c417b4704490c46c831a *man/nnet_fit.Rd
b61e0117f260566c1f75b0aed7628061 *man/null_states.Rd
b1dedafa4178107c56a729851f54a50d *man/ph-class.Rd
0a1afccd8227425bcff6915aa1a872ab *man/ph.Rd
318d632414888ec5d432af7ba1cc2e35 *man/phcdf.Rd
17fb68f76f1085c86f1400ad5bd36e73 *man/phdensity.Rd
970b95f0a5ed1296e69c7eff787a21ca *man/pi_null.Rd
0e1589707d190775a45fda9303d9474d *man/pi_pos.Rd
5c177b8a00ed746a7a15149d643c8b62 *man/plus-dph-dph-method.Rd
7ff846bf2517cd24a28cd805ad22535a *man/plus-ph-ph-method.Rd
4844d977394fa32d5b350536182f2062 *man/plus_states.Rd
94a564c719a828ff6cd06973d42f6a26 *man/pow2_matrix.Rd
28cdc2970fe9819326dd1e5f96097c2d *man/q_null.Rd
63ab15e24d05195843f9334b63cc96a1 *man/q_pos.Rd
a26d8e0d07da5bcee24718cfff70c4bf *man/quan-ph-method.Rd
1cb72131bc7479068c5db5cebecbbf5a *man/quan.Rd
0d0831918bdf45575f8262237db027fa *man/rMPHstar.Rd
a23b36282436a569e15352e2ebadde3d *man/random_reward.Rd
ae0b64540abb3758356022d226aef398 *man/random_structure.Rd
377b6b8e1b0b8d7cd8b08a5b1c4ca750 *man/random_structure_bivph.Rd
47bfdc29a3606572bca5b6b25474deb0 *man/rdphasetype.Rd
39c24c17f1ea0a0b356a4d3061734f0c *man/reg-ph-method.Rd
d6bd5eb9a223e593df66d207736f5f9d *man/reg.Rd
800a3fecee6a0f8c05023f1540661f44 *man/revers_data_trans.Rd
3f3d25d0d0d5abc7a7278e7e93190437 *man/rew_sanity_check.Rd
ecb37c14ddc00bc05289e8905ad71760 *man/riph.Rd
4014d7063decb6480d3798ba768f4739 *man/rmatrixgev.Rd
a3b588321a68ed42870196199c9e331c *man/rphasetype.Rd
40b05cb3300ae2476ab533917cba4099 *man/runge_kutta.Rd
922cc2a4ba30bfdec90ad16c9051c829 *man/show-MPHstar-method.Rd
df6d8a512d8afd5d3f94da686769c271 *man/show-bivph-method.Rd
631ad806f3f575804eef7ca52888669b *man/show-dph-method.Rd
44cee3fe1818a9203d50fb7bf45fd0a0 *man/show-iph-method.Rd
02ae273f280ecf6e1d9efaa7d4ee8b01 *man/show-miph-method.Rd
ad1e8e77099b34b1df4586ddea94bd3a *man/show-mph-method.Rd
f68215cf309237cc29c7758a8f6c88d2 *man/show-ph-method.Rd
05947cc4d165b2d0758607ddf57d483e *man/show-sph-method.Rd
545d104f28a7628f73debc4d17e6f15a *man/sim-MPHstar-method.Rd
bb1d073a366f122e44151d983580cbe6 *man/sim-bivph-method.Rd
18f0dc39c787d199a08c60149f537aec *man/sim-dph-method.Rd
c4fe4896ef2d51368d42d501b5c5a835 *man/sim-iph-method.Rd
16571fe58dddf3e93fd1382d403cc041 *man/sim-miph-method.Rd
704fb4de4f03a83f2c354e42a71ff3a0 *man/sim-mph-method.Rd
fba1242de708bff2d220a3425491e59d *man/sim-ph-method.Rd
93776e5793a3210c3d8bd38e30d95018 *man/sim.Rd
5006b802dab05ffc00c609be951c52a4 *man/sph-class.Rd
266ee853eb87a0803fa19a6803aabf7f *man/sph.Rd
9a315c3614b3aeb04f8f610a272dc4f6 *man/sum_dph.Rd
af6fce3909a6225619d5513d5f26e571 *man/sum_ph.Rd
87978b2d21b34c5279f7449c4966053b *man/transf_via_rew.Rd
4ef86969fde9f0a4c038ca7fc95a499f *man/vector_of_matrices.Rd
78d3b048abe9ab7e65775f2a36c7ac5f *man/vector_of_matrices_2.Rd
f1ba879278724ed1aec1050490e27dfe *man/vector_of_powers.Rd
853d914f1d15da83099f9acd5edf2a01 *src/EM_LL.cpp
0798a1ec41338749ba471f80d7390ab1 *src/EM_LL_PADE.cpp
ad89c6c07e01e987a4cd4d05e3183f00 *src/EM_LL_UNI.cpp
8c0903d1c889d81040c63cc2d8b408dd *src/EM_LL_UNI.h
1ed0aa42bd74777371d1809ba695b5cb *src/MPHstar_EMstep_UNI.cpp
61059660eb073d93e00e8ee054237071 *src/Makevars
61059660eb073d93e00e8ee054237071 *src/Makevars.win
fbb85d5c8eb577e99ad8bc7d094250a2 *src/RcppExports.cpp
55a619f7be99ab2524c87d55e971bba2 *src/Simulation.cpp
775a37e1dec9d61f4d14011ff1153474 *src/Simulation.h
44e74413ccecb26d43317db94e693205 *src/TVR.cpp
aa64ac409433349b79516edd75ed1709 *src/TVR.h
b6807abe386106824a3bf98bdcedaf2f *src/auxiliary.cpp
d6ae257f1542810b0feba06923a20855 *src/distributions.cpp
6e9916f526b2cb9db1d3ecafcc7f626b *src/distributions.h
4bd20dc41e2408efa8f342077e806566 *src/dph_EM_LL.cpp
ca66bf243703669b60b3c5ad8d651813 *src/mPH_EM_UNI.cpp
0c224d00f221963373d4343126466d8d *src/m_exp.cpp
076a8032e05febfe16b5ec42b1cb3c03 *src/m_exp.h
bc4ee26d2cf642e8a51d952f05ef4da2 *src/matrix_functions.cpp
98183a49651626231f6b4b47751cbed0 *src/operations.cpp
bca29edccc41836294b1d5403feb7a40 *src/structure_parameters.cpp
