* 2016-08-27(Tal Galili) updated NEWS |bbaa50e| 
|  NEWS.md       | 79 +++++++++++++++++++++++++++++++++++++++++++++++++++++++--
|  R/heatmaply.R |  1 +
|  2 files changed, 78 insertions(+), 2 deletions(-)

* 2016-08-27(Tal Galili) fix http to https |b82febb| 
|  DESCRIPTION | 2 +-
|  1 file changed, 1 insertion(+), 1 deletion(-)

* 2016-08-04(Tal Galili) key.title - a parameter to control the main title of the color key. |f218455| 
|  NEWS             |  2 ++
|  R/heatmaply.R    | 16 ++++++++++++++--
|  man/heatmaply.Rd |  4 +++-
|  3 files changed, 19 insertions(+), 3 deletions(-)

* 2016-08-04(Tal Galili) ggheatmap - first try. (not working well enough yet. The proportions of the elements are not good) |75056b0| 
|  DESCRIPTION      |  9 +++---
|  NAMESPACE        |  1 +
|  NEWS             |  1 +
|  R/ggheatmap.R    | 85 ++++++++++++++++++++++++++++++++++++++++++++++++++++++
|  R/heatmaply.R    | 33 +++++++++++++++++----
|  man/ggheatmap.Rd | 30 +++++++++++++++++++
|  man/heatmaply.Rd |  9 ++++--
|  7 files changed, 157 insertions(+), 11 deletions(-)

* 2016-08-04(Tal Galili) Added is.heatmapr |3befb25| 
|  NAMESPACE          |  1 +
|  NEWS               |  8 ++++++++
|  R/heatmapr.R       | 13 +++++++++++++
|  man/is.heatmapr.Rd | 18 ++++++++++++++++++
|  4 files changed, 40 insertions(+)

* 2016-07-15(Tal Galili) Requires plotly (>= 3.0.0) (although it needs plotly (>= 4.0.0)) - until 4.0.0 will get to CRAN. |df68118| 
|  DESCRIPTION | 2 +-
|  1 file changed, 1 insertion(+), 1 deletion(-)

* 2016-07-15(Tal Galili) xlab, ylab - add titles to the x and y axis. |657bdf6| 
|  NEWS             |  2 +-
|  R/heatmaply.R    | 31 +++++++++++++++++++++++++------
|  man/heatmaply.Rd | 12 ++++++++----
|  3 files changed, 34 insertions(+), 11 deletions(-)

* 2016-07-15(Tal Galili) heatmaply 4.0.0 requires plotly 4.0.0 |2ec4252| 
|  DESCRIPTION | 6 +++---
|  1 file changed, 3 insertions(+), 3 deletions(-)

* 2016-07-15(Tal Galili) print is no longer needed for plotly 4.0.0 |5a8bb28| 
|  R/heatmaply.R    | 2 +-
|  man/heatmaply.Rd | 2 +-
|  2 files changed, 2 insertions(+), 2 deletions(-)

* 2016-07-15(Tal Galili) hide_colorbar - controls if the color bar should be hidden. |7a68071| 
|  NEWS             |  4 ++--
|  R/heatmaply.R    | 23 +++++++++++++++++++----
|  man/heatmaply.Rd |  6 ++++--
|  3 files changed, 25 insertions(+), 8 deletions(-)

* 2016-07-15(Tal Galili) Made titleX and titleY work (now we need to gain control over the text there...) |4f88d36| 
|  R/heatmaply.R | 14 ++++++++------
|  1 file changed, 8 insertions(+), 6 deletions(-)

* 2016-07-15(Tal Galili) srtRow, srtCol - add legacy support for these parameters (they are passed to row_text_angle and column_text_angle) (and a few more things) |c815e4b| 
|  NEWS             |  3 +++
|  R/heatmaply.R    | 39 ++++++++++++++++++++++++++++++---------
|  man/heatmaply.Rd |  9 +++++++--
|  3 files changed, 40 insertions(+), 11 deletions(-)

* 2016-06-21(Tal Galili) now works with dendextend::seriate_dendrogram |c660794| 
|  R/heatmapr.R | 6 ++----
|  1 file changed, 2 insertions(+), 4 deletions(-)

* 2016-06-13(Tal Galili) Added seriate to heatmapr - a character indicating the method of matrix sorting (default: "OLO"). This uses the seriation package. |1229bf4| 
|  DESCRIPTION             |  1 +
|  NAMESPACE               |  2 ++
|  NEWS                    | 56 ++++++++++++++++++++++++++++++++++--
|  R/heatmapr.R            | 73 ++++++++++++++++++++++++++++++++++++++++++++---
|  R/zzz.R                 |  2 ++
|  man/heatmapr.Rd         | 10 ++++++-
|  vignettes/heatmaply.Rmd | 36 +++++++++++++++++++++++
|  7 files changed, 172 insertions(+), 8 deletions(-)

* 2016-05-31(Tal Galili) typo |8000882| 
|  vignettes/heatmaply.Rmd | 2 +-
|  1 file changed, 1 insertion(+), 1 deletion(-)

* 2016-05-30(Tal Galili) update docs |07eac02| 
|  R/heatmaply.R    |  9 ++++++---
|  man/heatmaply.Rd | 18 ++++++++++++------
|  2 files changed, 18 insertions(+), 9 deletions(-)

* 2016-05-30(Tal Galili) colors can now also accept a function (and will use it to produce 256 colors) |0b454e6| 
|  NEWS                    |  1 +
|  R/heatmaply.R           | 25 ++++++++++++++-----------
|  vignettes/heatmaply.Rmd |  3 ++-
|  3 files changed, 17 insertions(+), 12 deletions(-)

* 2016-05-28(Tal Galili) hover over dendrogram now returns the height. |0ae8868| 
|  NEWS          | 1 +
|  R/heatmaply.R | 4 ++--
|  2 files changed, 3 insertions(+), 2 deletions(-)

* 2016-05-28(Tal Galili) upload a smaller gif... |ff7004d| 
|  README.md | 2 +-
|  1 file changed, 1 insertion(+), 1 deletion(-)

* 2016-05-28(Tal Galili) second attempt at resize |c6ff17a| 
|  README.md | 2 +-
|  1 file changed, 1 insertion(+), 1 deletion(-)

* 2016-05-28(Tal Galili) reduce size |116e5e3| 
|  README.md | 2 +-
|  1 file changed, 1 insertion(+), 1 deletion(-)

* 2016-05-28(Tal Galili) Screenshot demo |0b8da85| 
|  README.md | 6 ++++++
|  1 file changed, 6 insertions(+)

* 2016-05-28(Tal Galili) Use RColorBrewer for colors |1bbc15d| 
|  DESCRIPTION             |  3 ++-
|  vignettes/heatmaply.Rmd | 12 +++++++++---
|  2 files changed, 11 insertions(+), 4 deletions(-)

* 2016-05-27(Tal Galili) Use divergent color map for correlation matrix. |74b33df| 
|  vignettes/heatmaply.Rmd | 15 ++++++++++++++-
|  1 file changed, 14 insertions(+), 1 deletion(-)

* 2016-05-27(Tal Galili) grid_color - control the color of the heatmap grid. This is currently not working until this feature will be added by plotly. |7a3937b| 
|  NEWS                    |  9 +++++++++
|  R/heatmaply.R           | 51 ++++++++++++++++++++++++++++++++++++-----------
|  man/heatmaply.Rd        |  5 ++++-
|  vignettes/heatmaply.Rmd | 20 +++++++++++++++++++
|  4 files changed, 72 insertions(+), 13 deletions(-)

* 2016-05-26(Tal Galili) Move the creation of the ggplot heatmap outside |68b9c81| 
|  R/heatmaply.R | 69 +++++++++++++++++++++++++++++++++++----------------------
|  1 file changed, 43 insertions(+), 26 deletions(-)

* 2016-05-26(Tal Galili) update NEWS |4f589d3| 
|  ChangeLog | 129 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
|  NEWS      |   6 ++-
|  NEWS.md   |  41 +++++++++++++++++--
|  3 files changed, 171 insertions(+), 5 deletions(-)

* 2016-05-26(Tal Galili) heatmaply 0.3.2 is now on CRAN! |67de297| 
|  README.md               | 12 ++++++------
|  vignettes/heatmaply.Rmd |  4 ++--
|  2 files changed, 8 insertions(+), 8 deletions(-)

* 2016-05-26(Tal Galili) Add examples for using htmlwidgets::saveWidget and plotly::subplot. (from issue #8 ) |cc2a9f9| 
|  DESCRIPTION      |  3 ++-
|  R/heatmaply.R    | 20 ++++++++++++++++++++
|  man/heatmaply.Rd | 20 ++++++++++++++++++++
|  3 files changed, 42 insertions(+), 1 deletion(-)

* 2016-05-26(Tal Galili) http -> https |883d56f| 
|  DESCRIPTION | 2 +-
|  NEWS        | 5 +++++
|  README.md   | 3 +--
|  3 files changed, 7 insertions(+), 3 deletions(-)

* 2016-05-26(Tal Galili) not on CRAN yet. |9f4b774| 
|  README.md | 2 +-
|  1 file changed, 1 insertion(+), 1 deletion(-)

* 2016-05-26(Tal Galili) heatmaply 0.3.1 - fix minor typos in DESCIPTION. |716066a| 
|  DESCRIPTION | 12 ++++++------
|  NEWS        |  5 +++++
|  2 files changed, 11 insertions(+), 6 deletions(-)

* 2016-05-25(Tal Galili) heatmaply 0.3.0 - first CRAN release! |5a0b344| 
|  NEWS                    |  8 +++-----
|  README.md               |  6 +++---
|  vignettes/heatmaply.Rmd | 17 ++++-------------
|  3 files changed, 10 insertions(+), 21 deletions(-)

* 2016-05-25(Tal Galili) Added a new Startup Message |464c02c| 
|  R/zzz.R | 88 ++++++++++++++++++---------------------------------------------
|  1 file changed, 25 insertions(+), 63 deletions(-)

* 2016-05-25(Tal Galili) Added row_text_angle and column_text_angle (with srtRow and srtCol for backward compatibility with gplots::heatmap.2). Fix #3 |bb106a4| 
|  DESCRIPTION      |  3 ++-
|  NEWS             |  5 +++--
|  R/heatmaply.R    | 52 +++++++++++++++++++++++++++++++++++++++++-----------
|  man/heatmaply.Rd | 25 +++++++++++++++++++------
|  4 files changed, 65 insertions(+), 20 deletions(-)

* 2016-05-25(Tal Galili) Add example for using layout+margin to see matrix labels. |e8cc550| 
|  R/heatmaply.R    | 4 ++++
|  man/heatmaply.Rd | 4 ++++
|  2 files changed, 8 insertions(+)

* 2016-05-25(Tal Galili) Moved "scale_fill_gradient_fun" after "..." so to fix #2 : Error: Don't know how to add scale_fill_gradient_fun to a plot |7e020ac| 
|  NEWS             |  5 +++++
|  R/heatmaply.R    | 32 ++++++++++++++++++++------------
|  man/heatmaply.Rd | 18 +++++++++---------
|  3 files changed, 34 insertions(+), 21 deletions(-)

* 2016-05-25(Tal Galili) rename the hover to row and column |9be7d2b| 
|  R/heatmaply.R | 9 +++++----
|  1 file changed, 5 insertions(+), 4 deletions(-)

* 2016-05-25(Tal Galili) Added rmarkdown to suggests |598bb5d| 
|  DESCRIPTION | 3 ++-
|  1 file changed, 2 insertions(+), 1 deletion(-)

* 2016-05-25(Tal Galili) Added knitr to suggests |6feb90b| 
|  DESCRIPTION | 2 ++
|  1 file changed, 2 insertions(+)

* 2016-05-25(Tal Galili) Add a vignette |e15b20c| 
|  DESCRIPTION             |   4 ++
|  NEWS                    |  11 +---
|  vignettes/heatmaply.Rmd | 158 ++++++++++++++++++++++++++++++++++++++++++++++
|  3 files changed, 164 insertions(+), 9 deletions(-)

* 2016-05-25(Tal Galili) no need to print in the output if plotly is in Depends |18b3897| 
|  R/heatmaply.R | 5 +++--
|  1 file changed, 3 insertions(+), 2 deletions(-)

* 2016-05-25(Tal Galili) move plotly to Depends (to reduce knitr problems) |91e6bec| 
|  DESCRIPTION | 2 +-
|  1 file changed, 1 insertion(+), 1 deletion(-)

* 2016-05-25(Tal Galili) TODO: maybe use plot_ly(z = xx, type = "heatmap") in the future. |7cd0d60| 
|  R/heatmaply.R | 29 +++++++++++++++++------------
|  1 file changed, 17 insertions(+), 12 deletions(-)

* 2016-05-25(Tal Galili) heatmaply: added the margin parameter (to control the distance between the heatmap and the dendrograms.) |93d9431| 
|  NEWS             |  6 +++++-
|  R/heatmaply.R    | 15 ++++++++++++---
|  man/heatmaply.Rd | 10 ++++++++--
|  3 files changed, 25 insertions(+), 6 deletions(-)

* 2016-05-25(Tal Galili) remove space between the heatmap and dendrograms (via: coord_cartesian(expand = FALSE)  and coord_flip(expand = FALSE)) |04d6a9f| 
|  R/heatmaply.R | 11 +++++++++--
|  1 file changed, 9 insertions(+), 2 deletions(-)

* 2016-05-25(Tal Galili) heatmaply Now works with Rowv=F and Colv=F (by introducing a new un-exported function: heatmap_subplot_from_ggplotly) |2e6517b| 
|  DESCRIPTION   |   4 +--
|  NEWS          |   7 ++++
|  R/heatmaply.R | 110 ++++++++++++++++++++++++++++++++++++++++++++++++--------
|  3 files changed, 105 insertions(+), 16 deletions(-)

* 2016-05-25(Tal Galili) scale got confused with scale_fill_gradient_fun |227749a| 
|  NEWS | 15 +++++++++++++++
|  1 file changed, 15 insertions(+)

* 2016-05-24(Tal Galili) Added the "text_angle_column" parameter to rotate column text (it is now 45 degrees by default). |c8c77cc| 
|  R/heatmaply.R    | 15 +++++++++++++--
|  man/heatmaply.Rd |  5 ++++-
|  2 files changed, 17 insertions(+), 3 deletions(-)

* 2016-05-24(Tal Galili) fix typos |f1f3dd8| 
|  DESCRIPTION | 6 +++---
|  1 file changed, 3 insertions(+), 3 deletions(-)

* 2016-05-24(Tal Galili) Use @importFrom plotly |3550233| 
|  NAMESPACE | 6 +++++-
|  NEWS      | 2 +-
|  R/zzz.R   | 6 +++++-
|  3 files changed, 11 insertions(+), 3 deletions(-)

* 2016-05-24(Tal Galili) larger titles |30d6725| 
|  NEWS    | 11 +++++------
|  NEWS.md | 11 +++++------
|  2 files changed, 10 insertions(+), 12 deletions(-)

* 2016-05-24(Tal Galili) Add NEWS.md + ChangeLog |89e2725| 
|  ChangeLog | 121 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
|  NEWS.md   |  35 ++++++++++++++++++
|  2 files changed, 156 insertions(+)

* 2016-05-24(Tal Galili) fix various import issues that caused warnings with devtools::checks() |862ff8c| 
|  DESCRIPTION | 2 +-
|  NEWS        | 7 +++++++
|  2 files changed, 8 insertions(+), 1 deletion(-)

* 2016-05-24(Tal Galili) Import packages so to fix various CRAN warnings and errors. |9d87c65| 
|  DESCRIPTION  |  9 +++++----
|  NAMESPACE    |  6 ++++++
|  R/heatmapr.R |  8 ++------
|  R/zzz.R      | 25 +++++++++++++++++++++++++
|  4 files changed, 38 insertions(+), 10 deletions(-)

* 2016-05-23(Tal Galili) from aes to aes_string |9c87c2f| 
|  R/heatmaply.R | 4 ++--
|  1 file changed, 2 insertions(+), 2 deletions(-)

* 2016-05-23(Tal Galili) remove CONDUCT.md |ac71a3e| 
|  .Rbuildignore | 3 ++-
|  1 file changed, 2 insertions(+), 1 deletion(-)

* 2016-05-23(Tal Galili) Code for calling devtools |6886408| 
|  R/zzz.R | 289 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
|  1 file changed, 289 insertions(+)

* 2016-05-23(Tal Galili) move magrittr and reshape2 from Depends to Imports (to remove CRAN NOTE on too many packages in Depends) |34005df| 
|  DESCRIPTION | 4 ++--
|  1 file changed, 2 insertions(+), 2 deletions(-)

* 2016-05-23(Tal Galili) Remove .travis.yml from build |1029ed9| 
|  .Rbuildignore | 1 +
|  1 file changed, 1 insertion(+)

* 2016-05-23(Tal Galili) colour to color |6462b3e| 
|  R/heatmaply.R    | 22 +++++++++++-----------
|  man/heatmaply.Rd | 14 +++++++-------
|  2 files changed, 18 insertions(+), 18 deletions(-)

* 2016-05-23(Tal Galili) Moved to 0.2.0 - new options for controlling colors and tiny bug fixes. |121ddc4| 
|  DESCRIPTION |  4 ++--
|  NEWS        | 24 ++++++++++++++++++++++++
|  2 files changed, 26 insertions(+), 2 deletions(-)

* 2016-05-23(Tal Galili) Invitation for feature requests in README |7c36615| 
|  README.md | 5 +++++
|  1 file changed, 5 insertions(+)

* 2016-05-23(Tal Galili) Better control over colors via scale_fill_gradient_fun fix #1 issue. |0b73791| 
|  R/heatmaply.R    | 42 ++++++++++++++++++++++++++++++++++++++----
|  man/heatmaply.Rd | 28 ++++++++++++++++++++++++++--
|  man/heatmapr.Rd  |  4 ++--
|  3 files changed, 66 insertions(+), 8 deletions(-)

* 2016-05-23(Tal Galili) now using "scale" will work as expected. |70d81d0| 
|  R/heatmapr.R | 4 ++--
|  1 file changed, 2 insertions(+), 2 deletions(-)

* 2016-05-23(Tal Galili) we use paste but we mean as.character |4543e64| 
|  R/heatmapr.R | 4 ++--
|  1 file changed, 2 insertions(+), 2 deletions(-)

* 2016-05-23(Tal Galili) remove axis text from dendrograms. |90de4ee| 
|  R/heatmaply.R | 16 ++++++++++++----
|  1 file changed, 12 insertions(+), 4 deletions(-)

* 2016-05-23(Tal Galili) Code to install plotly. |0d180dc| 
|  README.md | 1 +
|  1 file changed, 1 insertion(+)

* 2016-05-23(Tal Galili) Added row_dend_left parameter (it still doesn't fully work - but for now I'll keep it OFF). |c31a4f4| 
|  R/heatmaply.R | 32 ++++++++++++++++++++++++--------
|  1 file changed, 24 insertions(+), 8 deletions(-)

* 2016-05-23(Tal Galili) informative errors for mis-specified limits |87c815b| 
|  R/heatmaply.R | 8 ++++++++
|  1 file changed, 8 insertions(+)

* 2016-05-23(Tal Galili) use nrow and ncol |84791ae| 
|  R/heatmapr.R | 5 +++--
|  1 file changed, 3 insertions(+), 2 deletions(-)

* 2016-05-23(Tal Galili) Added the options: "colours" and "limits" to control the colors in the heatmap. (this may change soon to be compatible with heatmap.2 and also scale_colour_gradientn) |20638a5| 
|  R/heatmaply.R    | 37 +++++++++++++++++++++++++++++++------
|  man/heatmaply.Rd | 13 ++++++++++++-
|  2 files changed, 43 insertions(+), 7 deletions(-)

* 2016-05-23(Tal Galili) not on CRAN yet |6e83304| 
|  README.md | 2 +-
|  1 file changed, 1 insertion(+), 1 deletion(-)

* 2016-05-16(Tal Galili) The package depends on plotly 3.6.0 and above. |8ef793b| 
|  DESCRIPTION | 2 +-
|  1 file changed, 1 insertion(+), 1 deletion(-)

* 2016-05-14(Tal Galili) clear the gridlines from the dendrograms. |6c7d6ce| 
|  R/heatmaply.R | 19 ++++++++++++++++---
|  1 file changed, 16 insertions(+), 3 deletions(-)

* 2016-05-14(Tal Galili) For now, empty tooltip for the dendrograms. |3c14b9a| 
|  R/heatmaply.R | 6 ++++++
|  1 file changed, 6 insertions(+)

* 2016-05-14(Tal Galili) Fix basic NAMESPACE issue after moving to roxygen2 |3614dc9| 
|  NAMESPACE     | 3 +++
|  R/heatmaply.R | 6 +++++-
|  2 files changed, 8 insertions(+), 1 deletion(-)

* 2016-05-14(Tal Galili) First (very rough) version. It has a minimal working example, as well as MANY things to fix/tweak/adjust. |9e5fac8  
   .Rbuildignore    |   2 +
   .gitignore       |   3 +
   .travis.yml      |   9 ++
   CONDUCT.md       |  25 ++++
   DESCRIPTION      |  36 ++++++
   NAMESPACE        |  11 ++
   NEWS             |   4 +
   R/heatmaply.R    | 155 +++++++++++++++++++++++
   R/heatmapr.R     | 356 +++++++++++++++++++++++++++++++++++++++++++++++++++++
   README.md        |  91 ++++++++++++++
   heatmaply.Rproj  |  21 ++++
   man/heatmaply.Rd |  28 +++++
   man/heatmapr.Rd  | 117 ++++++++++++++++++
   13 files changed, 858 insertions(+)
