29aa1c14a1893bb12c4c4b5e0dc02350 *DESCRIPTION
f5ae625b4829811dfc403d666ca4ac8e *NAMESPACE
e89302276c7c6e400ddcd9af2cb4bf36 *R/AdjustMatrix.R
08e634387f7bd337975b26d4f024b8ce *R/Classes.R
4b8a05105bdebb97a5a221ab23fa1d5a *R/CompareMethodsNodeOrdering.R
31998c7aada7adf900139465a4795ce2 *R/CompareMethodsVStructure.R
bdd6b8d1d385cca188db626bb2d1d6eb *R/CutModules.R
127c72717e90aeb800ad6f279969a3c8 *R/EdgeOrientation.R
081d7ac9269afab015c97728a5cdf0ae *R/IdentifyAssociatedPCs.R
c9cdd63043439541a2cc1e96f247ce24 *R/MRPC.R
b2edca3b453ea2d7cf39c61eb7a65817 *R/ModiSkeleton.R
355dc6db63f79bb57c4794cd7a0fb80b *R/PlotDendrogram.R
9f21b117c2cd91be3d1eb6e525e341e8 *R/PlotGraphWithModules.R
ab5dcd6f793645efa5a0ecf97e43bf72 *R/RecallPrecision.R
5eb0174f189650b9cddd45da2359bcd8 *R/RobustCor.R
d18f79d53f46040e841c2a0914e36c2d *R/SeqFDR.R
b6f60154c3071f5d3ff1dc7201394129 *R/SimulateData.R
e2b1f329f56aa997bd03f557624ceb46 *R/SimulateData1P.R
2368d2e30db8f53c497e08402fe1e7da *R/SimulateData2P.R
44efaae532a7fa4d18eaecf0a93291c3 *R/SimulateData3P.R
90ca38a35df4a7393500997c9dd92a66 *R/SimulateDataNP.R
c15c9ef77d42b3924fc10589f3727070 *R/aSHD.R
7019faeca62c748ed44c269b282b1384 *R/empty.R
ba38adcd9e1ea7365085dda20e428e26 *R/mpinv.r
1df7ede1bf00623772dbfa2693ecdfe2 *R/seqDiff.R
e17d5bfb766771b4f07169804d8370f3 *README.md
498df0587b8d2b1db92a2bb89791eba3 *data/Data_GEUVADIS.rda
e3d6805ad692b2c9a8e4830c905355bc *data/MRPCtruth.rda
135a604c68d585825832756a817fb002 *data/data_GEUVADIS_combined.rda
0add230b7ddcd87a7be682b69ece43ec *data/data_examples.rda
a3045bf405e75e40a09d1a7e070f6192 *data/data_with_outliers.rda
b57db13333ab82d1eb68a6f8037f0377 *data/data_without_outliers.rda
ff9cbdc6b6913460ee46b43ed85a3248 *data/datalist
5c64b19ce1223d50311ee20a2d9b437f *data/simu_data_M0.rda
36e391fe6e409caca045dab7851a6cc0 *data/simu_data_M1.rda
ad3283b0b7f4c8a78bdf27c084365cad *data/simu_data_M2.rda
2eaf9a9616437822ed082bf1239b0489 *data/simu_data_M3.rda
c8a1f4f012cca0255b76cd3a49adbd35 *data/simu_data_M4.rda
2bdde4cb67110b0fe3c08a8d26ba792e *data/simu_data_layered.rda
b0c8a4f8622bd27533ac226c934d9f78 *data/simu_data_multiparent.rda
a165a4bbe0bc3df12bfc51f7ee1b5962 *data/simu_data_starshaped.rda
08dc2e9bec93a42ac18d3c7b55635911 *man/AdjustMatrix.Rd
ef2641b7bbcd6db99705dbf765837e90 *man/CompareMethodsNodeOrdering.Rd
9267505b620701b6788827aff60aa2f6 *man/CompareMethodsVStructure.Rd
08e3d8bd4cfbe0522036e87c805369d2 *man/CutModules.Rd
4e9b053fe39c5af58e18d8153d2f563d *man/Data_GEUVADIS.Rd
689218401749b6ec366d81f74047c9d8 *man/EdgeOrientation.Rd
29a34c1e7490dfa418ed0f92fad43f33 *man/IdentifyAssociatedPCs.Rd
729eaddbceb8ee855219b8350f8b0c6b *man/MRPC.Rd
d8758ba27486a6774e31fa18c6adac51 *man/MRPCclass.Rd
aef5d1069b118b3400e5a9f9dc697027 *man/MRPCtruth.Rd
bec63afa687acf6c9b1aae73a8d2d256 *man/ModiSkeleton.Rd
f82f72aa68c7cac47549e1135d4cbc88 *man/PlotDendrogram.Rd
bf8ec909623b9b05ea368794f9959623 *man/PlotGraphWithModules.Rd
e9c5d3e05b3ac5639a914caa0c168a5f *man/RecallPrecision.Rd
f34448b47947ad7c4f49001bbd0d3bd7 *man/RobustCor.Rd
c0a960d67d620540d4cae55140da4f3f *man/SeqFDR.Rd
6b66559cd6dd2566c4b84d4a731aa7db *man/SimulateData.Rd
41d61b85124ecc75e81a9a75aace43ed *man/SimulateData1P.Rd
2771beda2a159a1c4615ac87025cf42a *man/SimulateData2P.Rd
6207ccd6d7555eaca9c83bf82f234a32 *man/SimulateData3P.Rd
b8d232b291afc364e7292daf2d9a524f *man/SimulateDataNP.Rd
d2493c5291cf99cd33e628334da02eb8 *man/aSHD.Rd
b5cd08198f039f1216f25c320ed94a22 *man/data_GEUVADIS_combined.Rd
7da0799a18fc116418bc666efc2e33d8 *man/data_examples.Rd
40d0e7a236404b118c7bb11c126ea1dc *man/data_with_outliers.Rd
eb7313ab20f44f5cb3a35ca07199b93e *man/data_without_outliers.Rd
0e9a5e6001a5e8d5ae543086aa77135b *man/empty.Rd
ae7cc66c2feb9c10d81449e5b462969c *man/mpinv.Rd
1522baf571ba7596367d3eac30f8836a *man/seqDiff.Rd
3762888d4a5363ddf0cf929710117ace *man/simu_data_M0.Rd
f85c91305320ec42b1d0b360d0d18ab0 *man/simu_data_M1.Rd
4f31382d3bcbd077e726aaf6736571a9 *man/simu_data_M2.Rd
860b889e92d9941cc1f66b07abee7fb0 *man/simu_data_M3.Rd
1bc6933d437e21b903c0111b27ad7db4 *man/simu_data_M4.Rd
ca62959965f4abc8c54c127bd6d8c083 *man/simu_data_layered.Rd
2fac2c93ec32f444d796a5e0721a90d5 *man/simu_data_multiparent.Rd
47408969de2307da9ce2d2663751e224 *man/simu_data_starshaped.Rd
