d0f07ad589e6a5694ee327bb372744e6 *ChangeLog
4fdc0df242688a804c357a7dee4850c0 *DESCRIPTION
a06d5eb4cbe1e991c40cb3699045ff03 *NAMESPACE
d2b94a493886a5626f2e57014c4c8694 *NEWS
fd1c4a3fffbf0d980155edf616a0ee78 *R/GWASinspector.R
2b6f8ca5f5b8f311726b10604cf52867 *R/QQPlotFunction.R
cac80d51ae9be71147b95cfe5d1119c9 *R/Study.R
eabed33c95b79dc38a401d008b598543 *R/aaa.R
6ffab15a7be0e90518dd44d5b5ed92f2 *R/alleleMatch.R
c32543b2713ff0e7299e32bb952c1345 *R/altReferenceRelatedFucntions.R
49b986c84864f2c1b9ab58f20b7122d2 *R/applyHQfilter.R
c09d7bdec3bd76d1ce2d77fdb58510a9 *R/betaReferenceRelatedFunctions.R
d6e8c654901fc45de885ddcdfb52bd56 *R/calculationFunctions.R
f5c1a16edbcfea0c2e165ad7256d3800 *R/checkConfigFile.R
7e6712c58b18769de674068151d02477 *R/class_definition.R
8a8473e6bced26291ee1a314d5a24945 *R/compare_GWASs.R
f0678fc4d09ccfc6a8bad47f1727ecef *R/drawPlots.R
062e0a874c83bad4f71b3060c6e57e15 *R/effectsizePlotFunction.R
10965d65a326f7d97cf9a974287e2aab *R/exampleConfig.R
d192cdc1d5500bf7bcaa191c3e08eb3d *R/excelReportFunctions.R
59005ec5fba065456d08bc606f6b810c *R/fileFunctions.R
2566f03f4c89af57c0a427c58a127eaf *R/getConfig.R
ece11a453067c3bfeb9a947bfbfdf730 *R/getHeaderTranslation.R
a2719784730bf81cd99767ed18811b8e *R/headerRelatedFunctions.R
17d284b25685d9ef117ef355b30af1d7 *R/histPlotFunction.R
70cfa6ca7af5349a15f08ef57f91c454 *R/loggerFunctions.R
e073638f9f8c2bcc420f6654a08e9b22 *R/mafPlotFunction.R
68adf7b7d07587bb08bc7d016d2878f7 *R/manh_plot.R
3f35ee6501b65cabe723f443717c8021 *R/manhattanPlotFunction.R
ca5bd66f4bb2c6ae596203401bd05eae *R/multiStudyFunctions.R
d9e8cd487644348cff449c31e55b13b2 *R/multiStudyPlots.R
e229e4a905587102ad2e281c5764314b *R/pValueCorPlot.R
1f2cfdc3041c6c9ab7abe4f3ce91d04b *R/pValueFunctions.R
6f0b000136469f3b8d89423b0c6c1bd1 *R/processColumnNames.R
29a9f4814e5236e2d361cfa4942fccc2 *R/processColumns.R
8afceb41405ff2688fb3963b29e894d0 *R/processInputFile.R
e64b39dbf1533210405711822b3897a1 *R/rSQLiteFunctions.R
55ee88a01a4ca6c4d1c722f6e4a8f0b5 *R/referenceRelatedFunctions.R
4872727ea3af98fdee636add51a38d21 *R/reportRelatedFunctions.R
0f9a36e2f7349383d49f49dadaf823e0 *R/result_inspector.R
4271d5025d339ae3c198ea1e82144b60 *R/run_inspector.R
1b2abc18c86b2c004b3a8075de203705 *R/sample_inspector.R
5fd7fe1a61a9d75e45a8b3539127cf24 *R/saveFilesFunctions.R
8d49be1e4b1d5e8cf57204291dc03773 *R/setGraphicDevice.R
11398b9d517adfa1f2ff747167dca8f8 *R/setup_inspector.R
4c4986a58fe99d78047883a470077b7b *R/sqlite_db_check.R
fb11e2de92224c2537107623cdcb38ee *R/studyFunctions.R
67b93720d7978d0355e37be8b96ebb33 *R/suppFunctions.R
6dc8546747b1b5df9177bbcc1c4426d6 *R/system_check.R
a137e63f20d5837af53df3443b597de4 *R/terminationFunctions.R
a33e49292954e28c9a9fd64ecfba2d47 *R/uploadInputFile.R
7f038f49b316179372afd7f76f6ccac9 *R/validate.R
67fe2af78ce0fc6d555da6694c345384 *R/variantMatchingFunctions.R
0f8ac11251cd78046b0a8284e254e1f6 *R/variantModifierFunctions.R
93f12203a95a85731e67ea2c55cfad8f *R/zzz.R
f77033fe429086096e8d7325ddb4420d *build/vignette.rds
e2a5ef7bfe311b4bfd68fd02632d15d1 *inst/doc/GWASinspector.R
85088853afe782f7231a288351b6fc3c *inst/doc/GWASinspector.Rmd
a59bcdc8a6903e1a62b20711d70f9305 *inst/doc/GWASinspector.html
34df5f5f1f76a4d2b886c7772218110c *inst/extdata/DNA.png
0078e825648fdc7a0617a128ee7db8e2 *inst/extdata/HapMap_CEU_r28_b36_EDIT_v10c_sample.rds
e0ada085ec05bcc529d3167241edb238 *inst/extdata/alt_headers.txt
05de7838109e901af3556fd2994b9c3a *inst/extdata/chr_pos_map.rds
1eebc1676945c5d96413bd0cd607fe00 *inst/extdata/config.ini
a31e00da737640a3ec8c143829e7a695 *inst/extdata/sample.txt.gz
bc7aa3e0fa5dc204ccc803d7e04e1ae3 *inst/extdata/sample_db.sqlite
8656a46c3cf912fd447fd2d1f47f09cf *inst/rmd/mainReport.rmd
28e1ce2badaca6621e9cdc3eae7ecbcc *inst/rmd/mainReport_extra.rmd
883462c1be518ce6e2692d003f91ee08 *inst/rmd/multiFileReport.rmd
2a69b853aaaebf6f10460e4c51d472ee *inst/rmd/multiFileReport_alone_extra.rmd
5f29cc2d0470334acc3e9fca9769c6f5 *inst/rmd/multiFileReport_extra.rmd
c10b7e5f2de69b86160b8261ebf44620 *inst/rmd/styles.css
95d8149f0807630afacebfcca2d055d2 *inst/rmd/styles_extra.css
eede827f5557a1b58630d434808f01d8 *man/GWASinspector.Rd
90ce4338853aa3c1f7a4484bfd2f1287 *man/Inspector-class.Rd
81bf7d089200154f80d27b3bf2d7adef *man/Study-class.Rd
28abf830d914fe48e2305f661d274215 *man/StudyList-class.Rd
36c27bd99e31a945ad5bc85f5903e2a5 *man/compare.GWASs.Rd
ede5ca262bb34c1d1730166bb88446f6 *man/get.config.Rd
f41d65052402b8ad219d26827b5ea106 *man/get.headerTranslation.Rd
050d88e8f8b1b52926b329d65b7760a0 *man/man.plot.Rd
f7d0f3ccb0fc84d89bd234716ac515b3 *man/result.inspector.Rd
a6748b55cc53286485863f6ff5a31132 *man/run.inspector.Rd
7e5616ccc861254c40348a35a356be16 *man/sample.inspector.Rd
f8848595b950f03f4ee1e9ee92dbd45f *man/setup.inspector.Rd
8d7990e1f7ca059d1f2c8ea1ca2df02b *man/sqlite.db.check.Rd
7bbc45a5ce1aee41487844197244939f *man/system.check.Rd
85088853afe782f7231a288351b6fc3c *vignettes/GWASinspector.Rmd
