Functions:
=========

trio                    Generate trio data format suitable for trio logic regression.
trio.check              Check case-parent trio data for Mendelian errors.
trio.simu		Simulate case-parent trios with population disease risk dependent on SNP-SNP interaction

findLDblocks            Identifying LD blocks
getLD                   Computation of LD Measures
plot.LDblocks           Plotting a LDblock Object
plot.getLD              Plotting a getLD Object


Datasets:
========

freq.hap		Haplotype frequencies.
simuBkMap		Haplotype frequencies for simulation.
step3way		A used internally for simulation, containing some indexes and sampling frequencies. 
trio.gen1		Genotype data for trios.
trio.gen2		Genotype data for trios with missing genotypes.
trio.gen.err		Genotype data for trios with Mendelian errors.
trio.ped1		Genotype data for pedigrees in the format of a linkage file.
trio.ped2		Genotype data for pedigrees in the format of a linkage file, with missing genotypes.
trio.ped.err		Genotype data for pedigrees in the format of a linkage file, with Mendelian errors.
