# Generated by roxygen2: do not edit by hand

export(ML.RatePhylo)
export(RatePhylo.CI)
export(RatePhylo.allCI)
export(addFossilToPhy)
export(allCladeMembers)
export(ancState)
export(as.rateData)
export(as.rateMatrix)
export(cladeIdentity)
export(contemporaryPhy)
export(dropTipPartial)
export(fairProportions)
export(likRatePhylo)
export(likTraitPhylo)
export(make.anc)
export(make.likRatePhylo)
export(name.check)
export(node.descendents)
export(nodeTimes)
export(optim.likRatePhylo)
export(phyloCovar)
export(phyloMean)
export(phyloVar)
export(plotPhylo.motmot)
export(sampleHiddenSp)
export(sortTraitData)
export(timeSliceSummary)
export(traitData.plot)
export(traitMedusaSummary)
export(transformPhylo)
export(transformPhylo.MCMC)
export(transformPhylo.ML)
export(transformPhylo.ll)
export(transformPhylo.sim)
export(transformRateMatrix)
import(MASS)
import(ape)
import(caper)
import(coda)
import(grDevices)
import(graphics)
import(mvtnorm)
import(stats)
import(utils)
