d1ac9a919c4ac1d6fe7773ec41b295ae *DESCRIPTION
84dcc94da3adb52b53ae4fa38fe49e5d *LICENSE
996c7d6ae71f844f1e980e3796a2c3f4 *NAMESPACE
6569be4025a5244a961c99a8d64bb6b2 *R/Hmsc.R
ab4d4e079ee4460a7073953fc8ea2daa *R/HmscRandomLevel.R
c2b70784decbff022f2434b8dd076031 *R/alignPosterior.R
f485774537868fa0763fe44095b15277 *R/biPlot.R
1e20f4acd1ec94db59d4634e4557aeee *R/combineParameters.R
a0d8d1011598b2644c1f2ece0fde8468 *R/computeAssociations.R
b13ddc81a22a7252b8bedb77cde45cd5 *R/computeDataParameters.R
4aab85669ad2089358ec2b1807338cb5 *R/computeInitialParameters.R
59a15e65c5bea79212a56b8ffcd59645 *R/computePredictedValues.R
35ccbc0aa970dda516f1606a8cdcbf7d *R/computeVariancePartitioning.R
3dd3d5da41cb8993c98dee2f9d9a192c *R/computeWAIC.R
bd308893a2f775499166ae3bbd35e659 *R/constructGradient.R
14d5c950e10282c47789f5e912a10ead *R/constructKnots.R
5ea8e681ca06bc5da3c1aacd65f982c0 *R/convertToCodaObject.r
d166a9836a73b1d6fa560f271707bc09 *R/createPartition.R
ab8c3df16e55097b67d9e0138195050b *R/data.R
2ae2a4a374fbbe6765ff32bb5535d00a *R/evaluateModelFit.R
c4485f6af4b4b47b00e52d8fb3eeaa4c *R/getPostEstimate.R
014491d096d3317cfbde80353e527a9b *R/plotBeta.R
43fcfd69aa468fe27a81f6f61b8213b1 *R/plotGamma.R
bf86b579898a366d27cb11b62fe1e30a *R/plotGradient.R
2d036d2213cbd64ab37230a51d0053d4 *R/plotVariancePartitioning.R
878f9899fb8d58c3bba1bc427d1f62c5 *R/poolMcmcChains.R
a5c3feae870182f2697588152b4cd166 *R/predict.R
1690b40aa6fc40e9a690f7856a5023a7 *R/predictLatentFactor.R
aac4c52d9773713c80ef17c653528c1d *R/prepareGradient.R
c71b5b8ec89189a2bc360de0dab8fce0 *R/print.Hmsc.R
27dc78595358da73ef1e55c346340fcd *R/print.HmscRandomLevel.R
a954c5f3b6fd92bb46cec857745860f9 *R/sampleMcmc.R
e2c63d11ce5262b5dd9253462c83ff11 *R/samplePrior.R
3dbefa571a4ca169218e4416ab678411 *R/setPriors.Hmsc.R
d0219750b4dda1a79f10d7c568376619 *R/setPriors.HmscRandomLevel.R
f07c3d4f152cf07048a52b4bdd42d641 *R/setPriors.R
45ff8085a9d078b8318aacf1bc03d6c2 *R/updateAlpha.R
b97a15456b88542753d005f3b71d39a5 *R/updateBetaLambda.R
a432e8801eb900fb92a1562b24164b52 *R/updateBetaSel.R
cff8861899400ed0b6df64a45929cc34 *R/updateEta.R
1fb0422fa16d28c4c9ab9fb308b6ee77 *R/updateGamma2.R
d76f5f95080faf185dc3209f00d027a4 *R/updateGammaEta.R
a0823decbdfb4bc03064a56a920662a0 *R/updateGammaV.R
895f35048554ff5687a05d85e22a26e9 *R/updateInvSigma.R
babc0d1c9fcf306326cac51a5ffc0778 *R/updateLambdaPriors.R
b68f208c814595eba1bbbfceec0bc12a *R/updateNf.R
d389cdbbea14f97d9fb9d7619864b163 *R/updateRho.R
663188b3caf3e558c0669c517a789c3c *R/updateZ.R
7c175a78fda176675c16d4eaf6f8979d *R/updatewRRR.R
aeec5d4ccb44f9b04193c1c39609f3c4 *R/updatewRRRPriors.R
f697f3da3486c4f3e6ddc0d2862ab42b *README.md
4815b967da9aac1a3f7291d338c04697 *build/vignette.rds
3534cff7adc1bf2bc82d8bfd6cc1ed41 *data/TD.rda
7951d70269db570509353eb857a29045 *inst/doc/vignette_1_univariate.pdf
6fb15f62f62e2601b2da0e7869eb49c4 *inst/doc/vignette_1_univariate.pdf.asis
388c4d606585c82d928c3717a8b649eb *inst/doc/vignette_2_multivariate_low.pdf
ccfb64fa2ba729cf73fb7f0e5ebec8a9 *inst/doc/vignette_2_multivariate_low.pdf.asis
a62efa0fe78ae371da823c9a8de1018e *inst/doc/vignette_3_multivariate_high.pdf
1cdc01283b89407b8719f73b6c6fd821 *inst/doc/vignette_3_multivariate_high.pdf.asis
94fa827c9897848cae973049c2b9b862 *inst/doc/vignette_4_spatial.pdf
788ffa1fbcbd02f0959a080069f0364d *inst/doc/vignette_4_spatial.pdf.asis
0626e36e67abdd6d44df3f16af02f8f5 *man/Hmsc-package.Rd
088abb37a23abd4011f01b5b1bb7e305 *man/Hmsc.Rd
19c24dfaa7ac5d37475559439cdbea3c *man/HmscRandomLevel.Rd
5ee485920b1fdbaf5385a434016d1505 *man/TD.Rd
6b8a4d1eb6900c23a685890a609c6916 *man/alignPosterior.Rd
38a9013be6d93d9b94ea5dd3ba55ea3a *man/biPlot.Rd
bc477871a00dda9ad26d7173cfa94949 *man/computeAssociations.Rd
ef44984f1cc6eed423287587b5cf7bf7 *man/computeDataParameters.Rd
06caf3f5413855c8cb809ebb59ddd8e8 *man/computeInitialParameters.Rd
6021ad13c895be349084e350fa92e1b2 *man/computePredictedValues.Rd
69c2bd6e5836a60fbcae808c0946e289 *man/computeVariancePartitioning.Rd
6ac05285e22dc1c3d68f36e2d5f91150 *man/computeWAIC.Rd
ef400f4a7c3b40b9ea16038874cff18c *man/constructGradient.Rd
1ee8c4640f58300d3f8f88aaaf896105 *man/constructKnots.Rd
065904d6403496b342af9a10060b8a29 *man/convertToCodaObject.Rd
099282c8f1be3fa8f3f7b3d116361c57 *man/createPartition.Rd
b3aa13dbf8b528058baa85267d26ea70 *man/evaluateModelFit.Rd
3529e4ede2bc0d4de207518589adead6 *man/getPostEstimate.Rd
013c5257ea94209cfe266b875776b7d6 *man/plotBeta.Rd
0929ac6f27d2ed5fbca080b07f4da249 *man/plotGamma.Rd
9899a741786b88191133fd9e99c72ca1 *man/plotGradient.Rd
8291187e5e1c464f19e5de5ae527dfee *man/plotVariancePartitioning.Rd
c51061e9ac8c4594e08eeeb21987b23f *man/poolMcmcChains.Rd
7ad0674fd5f83263d18ab04a2f2b8c4f *man/predict.Hmsc.Rd
219eeff3889602dfdcaafffc78a7189a *man/predictLatentFactor.Rd
eab843beba4a93b8b389774948edc653 *man/prepareGradient.Rd
b051acdb2b581fa9872fb4d2f47474f1 *man/sampleMcmc.Rd
518b7aecf3f720cd8a22e50bf6a67ab5 *man/samplePrior.Rd
485ab727eabf36c1bc6b568948915ac5 *man/setPriors.Hmsc.Rd
6667481054d2f58b425b771592a040fb *man/setPriors.HmscRandomLevel.Rd
521784c9ff4ed56cf0c0cea384aa62ef *man/setPriors.Rd
ce7071dae80cd7b55a1b2689a2895e9d *tests/Examples/Hmsc-Ex.Rout.save
36e9abe5dd74239636c3358fbb7d3514 *tests/testthat.R
33b98c29d0c00df59e734fa071990469 *tests/testthat/test-WAIC.R
06086f6bed3d7c8e26ef47b800776c3c *tests/testthat/test-initialParameters.R
75422930c247ddbf3211df2b7809a5fd *tests/testthat/test-sampling.R
073e72d4a63029e02b0583bd4d6264d3 *tests/testthat/test-setHmsc.R
48a40717e08479e26bc21456c9dbf184 *tests/testthat/test-setPriors.R
528b6e76ea7bf22963e4977783393992 *tests/testthat/test-setRL.R
4de384b41b69f6fe679e8c5983fa4bf1 *vignettes/vignette_1_univariate.Rmd
6fb15f62f62e2601b2da0e7869eb49c4 *vignettes/vignette_1_univariate.pdf.asis
53e888e9054b750a74f9cda909260eb3 *vignettes/vignette_2_multivariate_low.Rmd
ccfb64fa2ba729cf73fb7f0e5ebec8a9 *vignettes/vignette_2_multivariate_low.pdf.asis
8c90341ac28e7fa959e59e0ca74677d5 *vignettes/vignette_3_multivariate_high.Rmd
1cdc01283b89407b8719f73b6c6fd821 *vignettes/vignette_3_multivariate_high.pdf.asis
0b5ea37bb993d66c9c05f899235269a5 *vignettes/vignette_4_spatial.Rmd
788ffa1fbcbd02f0959a080069f0364d *vignettes/vignette_4_spatial.pdf.asis
