49318812b501c9a7c6c0da3044b97a58 *CNVassoc-Ex.R
77e5152bcb92e3e1581d36f3a4fc15cf *DESCRIPTION
8e2b94021c08a9d90c861b2e62616feb *NAMESPACE
3e803cef4c2244f3e852facff076f90e *R/CNVassoc.R
94c46187b4e037c409721bbd345e2245 *R/CNVtest.R
83b7b83e822dbc9d9e4727a5f3beb8b3 *R/EMWeibull.R
c385f42856d8da52bce848a88f7ccfc9 *R/EMlogistic.R
cec347dce5548c7aa9ef6664f6199fc4 *R/EMmixt.R
b1d708ab7ae7e190e99bf5b2047e7eec *R/EMnorm.R
4cdea2ba368718a9e0e17cf51143ac36 *R/EMpoisson.R
5160d391566ff1b12dde206b820f8ac5 *R/NRWeibull.R
30cf4fe93c811484103c13ed51a17788 *R/NRlogistic.R
ee1af71b94d6a34c10d55246181d2647 *R/NRnorm.R
a9ac3b22125a4a061436cc4f2157226c *R/NRpoisson.R
ad86f652a870fec5d51649c2b9e6b035 *R/anova.CNVassoc.R
47bfcc8f2cf22d2e53211ff03ed42154 *R/assocCNV.i.R
966539b0608d955ba6317afe7f535cf2 *R/checkCNV.R
c21881f2da0333be49c5ca3e8221e8fa *R/classCNV.R
0e4995242d10fe2254af74ed5cd4bc08 *R/cnv.R
97453a5c1848c812c591dbfe03d8e992 *R/cnvBatches.R
bfabe144fa10f6d3f86f8dceb648d003 *R/cnvDefault.R
cafddf5a5e036a2c24bad7c9b3c01730 *R/firstlib.R
9a6ff8ad8c2e829e9ddb924e1dcac4db *R/getProbs.R
2b9d61e4a8091f01c065a10b617aeb53 *R/getProbs.cghCall.R
754450c479089c5e78dbee822951e030 *R/getProbs.cnv.R
977ce18986dd84c8e0d2baca27eb0242 *R/getProbsRegions.R
31a18b6bfc0a25c10d88f5aa2b408a99 *R/getProbsRegions.i.R
0aa13417043ef55435e8327b787c19a9 *R/getPvalBH.R
aee88af6c2db9e44b44289102e211899 *R/getQualityScore.R
b54bf06147a622bc2d41d449cbdda332 *R/getQualityScore.cnv.R
e88747096c24bb49f5c17854052e7627 *R/getQualityScore.default.R
1e15a7165d6a3aaef7b26a49ece31429 *R/hessianLinear.R
9d9bdc086aa27f9eaa2ff89f6df08c8d *R/hessianLogistic.R
afec641f5c37e81a79ff8f742129ffa3 *R/hessianPoisson.R
a2d650cabd9f56799712ced68a0134fa *R/hessianWeibull.R
592d87a93f770b34279c2abfd955c97a *R/ifelsem.R
39171a00fa7054a3040b903af469bed9 *R/is.cnv.R
7d61e9091bb06a8d269f517caf64608a *R/is.quantitative.R
4bdadbc2aade9409b019ebc0bc909d86 *R/linear.fit.R
7bf08b43b79ac38d2b440f41f5359ca7 *R/logLik.CNVassoc.R
5f35b4b2ac132c0becc3518fe14e6ea4 *R/logLik.survreg.R
044f3d859ca3344050a6461f47c6a19e *R/logLike.logistic.R
ac928c16856006894f649403f50244f5 *R/logLike.norm.R
39f564bb23016274a73ac7058947d6aa *R/logLike.poisson.R
a73d9b88af5726814041c720610d2750 *R/logLike.weibull.R
89c667e45f60fe89a634828cc9fb32b8 *R/logistic.fit.R
67084db74c8df8e42f7bd8ded22d4c02 *R/matrix2vector.R
caa024c04808a910b858339d538a759e *R/mix.R
4793b3fdd7bc991147c483f220676869 *R/mixture.R
16ec75689a165063113c5a5226bf9c6c *R/multiCNVassoc.R
04b97377716d1458a0e890bf77809b78 *R/plapply.R
8124db16a2d91e1ff641a305638cafa5 *R/plot.cnv.R
03edc05932c814f6c8d6b02a7a544fc8 *R/plot.cnv.intensities.R
6c71765c2dca2a0f26bdd6e727ef023a *R/plot.cnv.probabilities.R
fe7e236f0881666c3aecaecb1f4b18ac *R/plotSignal.R
94923ddd2a053a2afedb747243d204d1 *R/poisson.fit.R
29ba31ac7230368b119f6e707ec5e2c1 *R/print.CNVassoc.R
edcb4845b61f45d67fa23d20d2a75003 *R/print.CNVtest.R
548a3d7f88da5f913d3a283d6860572c *R/print.QualityScore.R
0b1964bbf1a6c5dbb2d4bff585ca4b48 *R/print.anova.CNVassoc.R
398154f652e6c56d8cf1e2549a6da565 *R/print.cnv.R
3f69aeda29917cb02e7f19e9ef23ea98 *R/print.summary.CNVassoc.R
fe7e236f0881666c3aecaecb1f4b18ac *R/signalPlot.R
7b4bd0834669156880251f88bc39b32e *R/simCNVdataBinary.R
53ebaf921dc71dc1b0db88b28337f503 *R/simCNVdataCaseCon.R
2a55767c7521d7a11538fcfdec6e0f97 *R/simCNVdataNorm.R
c7e57e29e5d6d011b85d182d7df92d66 *R/simCNVdataPois.R
54cff9de0ef7edfb5005c9a998a2eaee *R/simCNVdataWeibull.R
5aef29d30070a2609156c9918e204deb *R/simNormMixt.R
3db0e2c2a51a6014b01e963c40950e05 *R/subset.cnv.R
b2087ef0ecc26840047e246124227f42 *R/summary.CNVassoc.R
40f67cc608c344c75dcfee3ae834a49e *R/vector2matrix.R
2c3805d11eb96eb94a5079e606e9b37b *R/weibull.fit.R
c2ce940b6656611a133a82aec1064c5e *R/z[.cnv.R
00e6ccb63deb18c0f1c598c0b6259421 *data/A112.rda
5ac8ea3b9dadc500f59030299fa06c84 *data/NeveCalled.rda
365d7f18e3e1325add6d92366c6e2f4b *data/NeveData.rda
ba3e799b5d7c6e1bfba7bb542ef032d0 *data/NeveRegions.rda
103662b4e129099ec081f0edc0cecce4 *data/SNPTEST.rda
f5295311f3cd6e1112eb4401f48e7e50 *data/dataMLPA.rda
dbdef6b706dfe06846f7987be8526814 *data/datalist
42a38f43e61581aa62117741e417f5c1 *inst/doc/CNVassoc_vignette.pdf
90e121d77e0997f59d7dbc97e2c4cfb0 *inst/doc/changelog.txt
6044abfb9619e9f738cd1e8139628281 *man/A112.Rd
80a8a11e66d21ddc99006a40d5c45b7b *man/CNVassoc-internal.Rd
839349c61702776793b56570622140fa *man/CNVassoc.Rd
ea119098f08fd354a7e25b76b53ed456 *man/CNVtest.Rd
0d1fb625f51d3b2833e8663b4123e8b9 *man/NeveCalled.Rd
b6c509a2713037e7a3c53d7c288e3dfc *man/NeveData.Rd
2ab69cc55d9dd467dff0e0c78b6369c0 *man/NeveRegions.Rd
ce77548f1a84a2111e512738a3c8ec6e *man/SNPTEST.Rd
4ed7b66d3f7141d3fcca4f8350469fb8 *man/cnv.Rd
0b421c73d52eecf4e057ae4ae77c5250 *man/dataMLPA.Rd
b3d2331e1f2e5085b51e686bf74f9ccf *man/getProbs.Rd
c30a1042332eb4416b1d1763dbfc231a *man/getProbsRegions.Rd
1b46884a966207212e28b1756be0e969 *man/getPvalBH.Rd
cb6a6830e06d009490eaa321063024b9 *man/getQualityScore.Rd
24692693ff12f7434066f22a73c67343 *man/multiCNVassoc.Rd
5bba9c30074c29baa84a388570d250f4 *man/plotSignal.Rd
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45e52db1dea78692d157373d091377cf *man/simCNVdataCaseCon.Rd
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4574e6f637acf6dfc5f34ccfdef0b481 *man/simCNVdataPois.Rd
448824ad7068961b00179838a6820b85 *man/simCNVdataWeibull.Rd
525a1a30433bfb96c93bf14f9b971017 *src/dqrls.f
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