05f93ebb6128fd3ce57e63c6e464275f *DESCRIPTION
56c863e116fcf11c612026908427e6df *NAMESPACE
dc0ff636346954f8c3fc441a532f0971 *NEWS.md
ba5a086a0552c8ec94259dc5244757cd *R/calculate_best_shifts_stretches.R
c4492517cf44aa7babf987ec5d42f82f *R/calculate_distance.R
e330d688850d9e7884bcb25cfda3c6b0 *R/get_shifts_extreme.R
4db693b958e9ec7659f86bba99820160 *R/greatR-package.R
624bed345e8160dd98cc2c0ecfa49cba *R/prepare_data.R
d7d790febbd1cbd6611a7b77d9b1f53f *R/process_data.R
eaef95f53bffc0cc361a1bc8faa8d06d *R/shift_and_stretch.R
6ae9fce84885c31672369dc171a723fc *R/summarise_results.R
00f45192c3d8048593035a6d36e67879 *R/utils-calcs.R
b8a7af1dd0c58a426a8cadd004a09237 *R/utils-data-table.R
65cef5e0674056f6fc07dd2b3ca85c13 *R/utils-pipe.R
f652a8bd77b6a7b52a9e23791647b52a *R/utils.R
3e83acf19955ba1040b28c0865b04dc4 *R/visualise_result.R
50efc9c7b45a4f6846dab04a971de043 *README.md
554179dd48a2e3de9fbf42dda7f5becd *build/vignette.rds
6d7a326e98e2085ebd91a5ef04477d4d *inst/doc/prepare_data.R
d51f03292fb04f7283edf1c0b4ea3f91 *inst/doc/prepare_data.Rmd
7adbeeeac7a314254ac002beff956c96 *inst/doc/prepare_data.html
be7cbcd2dbb6ab3912e2ecc940b85a01 *inst/doc/register-data.R
f6100249481e945c26da6305253d336a *inst/doc/register-data.Rmd
1e8aeb6b840aca3c9e44ce37b812cba3 *inst/doc/register-data.html
b2ed5b1903c3a7df1d7612032b68f255 *inst/doc/visualise-results.R
608e7cb932c1dc34564bacddbdda2e31 *inst/doc/visualise-results.Rmd
532a061a8fb7165fd7501587d652b405 *inst/doc/visualise-results.html
a99ef28f6e666f9282c59c20187dbfb0 *inst/extdata/brapa_arabidopsis_all_replicates.csv
fd0b7bc05f1b110c17909514bb17cbe9 *inst/extdata/brapa_arabidopsis_mean.csv
dfb2324dfa561fd1671f138f05d683a6 *inst/extdata/sample_data/arabidopsis_expression.rds
025aac55fc6afb73605b89ff39705264 *inst/extdata/sample_data/arabidopsis_expression_5genes.rds
a5bd04b77db0c00d93731a4d0a92c9dc *inst/extdata/sample_data/brassica_rapa_expression.rds
a834436f45fecc809121efa5e94c5d83 *inst/extdata/sample_data/brassica_rapa_expression_5genes.rds
b510e99e4e4362551fcd0a0deda08f42 *inst/extdata/sample_data/id_table.rds
a10aba62c9873a69ae48b0466a90bdc5 *inst/extdata/sample_data/id_table_5genes.rds
320a26a725b6f19700eb1c596024a8af *man/calculate_between_sample_distance.Rd
b390cf54b6b770694d3f6758774d8041 *man/figures/greatR_workflow.png
dc28c4e5541b71bd9652e8719b4d795e *man/figures/logo.png
aab1cdaf2ddbe88672a141ebfc0f8cf6 *man/get_approximate_stretch.Rd
47d4ef75abdbc6f8ca563b715a582fad *man/get_expression_of_interest.Rd
fc00a9e066ab12e4820c23fb34963dcf *man/get_mean_data.Rd
4894ca10756199e25f914bfd34f517b0 *man/pipe.Rd
e4798716c7261ec52b6db7e664a0acc4 *man/plot_heatmap.Rd
9002adf104bd0c42679c5fa0a1429e05 *man/plot_registration_results.Rd
5f97cbe6e969a2e58fa97a23aab32d80 *man/scale_and_register_data.Rd
77a1c775586076d17dd07baca9242856 *man/summary_model_comparison.Rd
d6025d03d394eab4b6753b4931b6a96c *tests/testthat.R
25dde2b444ceb8994394b582b000df97 *tests/testthat/test-prepare-data.R
440f716ed67ea026d81112c032993d81 *tests/testthat/test-process-data.R
9af934384f0c5d126f29da9cccd35c20 *tests/testthat/test-utils-calcs.R
0a402ce546cba5e6c0d720e8c25a33e0 *vignettes/figures/all_data_illustration.jpg
1398bd39cea37efd437d2e1f6e5aeb68 *vignettes/figures/mean_data_illustration.jpg
74525183b54aff5b6299f57bc0e809b3 *vignettes/figures/prepare_data.png
177089938cd701fc90ad960688bb4ddb *vignettes/figures/registration_process.png
a350dc9bf1fc5e0840be20cdde224b64 *vignettes/figures/visualisation_process.png
d51f03292fb04f7283edf1c0b4ea3f91 *vignettes/prepare_data.Rmd
f6100249481e945c26da6305253d336a *vignettes/register-data.Rmd
608e7cb932c1dc34564bacddbdda2e31 *vignettes/visualise-results.Rmd
