87797ca21091e92e996206ec7285a550 *DESCRIPTION
ee149e25045396c43e7d2dbb1ec515a0 *NAMESPACE
e9b9e4190015c65a6c7d9d69c0b6c933 *NEWS.md
32f1c2380021247fda43666f9d21384a *R/adjmat.R
1dc1fda1fcd629f555f7251c3c02a92c *R/commonlink.R
f7bb1fc9e2d00b0f78c0b716fdc29894 *R/distance.R
893bf21b6b128c5fbd59b572845f8cd2 *R/generate.R
695729d93c9394238085645a2b9dda05 *R/pi3k_akt_graph.R
015a7cdfa6d42b3e991f4a5455e7dee9 *R/pi3k_graph.R
76c4de62f425b5dff6dfe757594f3d45 *R/plot_directed.R
9f051c5a65c895679faa8ca457ab833f *R/raf_mapk_graph.R
5231b0e646ee7b60ae8dc42c3411957e *R/sigma.R
fbac2cf2cce6a677428056f6bb7a6473 *R/state.R
5d6f7aa7ca918655204d5f3b89155cbc *R/tfgb_smad_graph.R
a0cac4936ea8e9e651f807a9b8041fe0 *README.md
3c08cc782df85b72cc63833f53e36665 *build/vignette.rds
b8d0d83b496956f3e16e9c757c218bac *data/Pi3K_AKT_graph.rda
de137d624c1304133c5b156331e56ce4 *data/Pi3K_graph.rda
15c31b03e1277c55e12c40036c040932 *data/RAF_MAP_graph.rda
ac456a326e02ba775064e1640672b297 *data/TGFBeta_Smad_graph.rda
b127c49be1355b6188666140c4f644e7 *inst/CITATION
8501e813b91f99063223331e6a54f31e *inst/doc/plots_directed.R
6cbbe07fabdf35ca27a588768e8f840f *inst/doc/plots_directed.Rmd
5ad1b83fbdce44a88368b3f4d775b003 *inst/doc/plots_directed.html
b614ecb1ddf4bc8b27f5e76bafb0db70 *inst/doc/plots_viral_quantitate.R
5faf16cb9c8c7f253414a8d2d98a0a2c *inst/doc/plots_viral_quantitate.Rmd
0a134a563e890ca1f4d96a090676e4c0 *inst/doc/plots_viral_quantitate.html
1393531e8dd21fca04e003350745f69d *inst/doc/run_example_pathways.R
f30cf79a2a0d8cc5f29fd40813f69a0e *inst/doc/run_example_pathways.Rmd
a085bf34174410c0b624987df7d8e875 *inst/doc/run_example_pathways.html
272c5cf5a8bc703c766b89c9a70c7c3d *inst/doc/test_graph_convergent.R
e266dab0bad5c066f9ee7e6bb6d2cc27 *inst/doc/test_graph_convergent.Rmd
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658acebb3693095f17cebe557ee8d412 *inst/doc/test_graph_divergent.R
c3e6a6658da15170be2d37a5a1051a21 *inst/doc/test_graph_divergent.Rmd
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05d6183d1c42a219f750ffb55ac376cb *inst/doc/test_graph_network.R
1be2092295d9d28239ec0fe6d263ffa5 *inst/doc/test_graph_network.Rmd
697b7ee228ee4da2298d547d92d540dc *inst/doc/test_graph_network.html
ae0a5bd6c21baaaf3bc1f6428c15b395 *inst/doc/test_graph_network_inhibiting.R
8b8d851cdbcba7cd03839bc4fa13a97c *inst/doc/test_graph_network_inhibiting.Rmd
dd4fe57498af0662325e8117c4b6e896 *inst/doc/test_graph_network_inhibiting.html
ce8b876973edc7dc112f563e94064fdf *inst/doc/test_graph_reconvergent.R
e8313b80dd290a85341e8f113f717c04 *inst/doc/test_graph_reconvergent.Rmd
ea810964a296395e2a2cbe0eb9f9dd52 *inst/doc/test_graph_reconvergent.html
abf0cc11c076ea41c0aa7002214f9682 *man/Pi3K_AKT_graph.Rd
9cd283ff8a804497f827fb84ef67f5e7 *man/Pi3K_graph.Rd
cffa061abcf36e144c1379f353cba509 *man/RAF_MAP_graph.Rd
44a1998d6fe16cc3bd4fe26a380441e7 *man/TGFBeta_Smad_graph.Rd
6a5df534559bd529d9f861f9e5744708 *man/generate_expression.Rd
6f13a38a2bec17b306fd0c1a3fcbc00f *man/make_adjmatrix_graph.Rd
9dc986f95ab82153335685b4c5d4cad5 *man/make_commonlink.Rd
f427e9f3b1f7874df45ce39b708bf1fc *man/make_distance.Rd
66bfdf02ac28549e35c5e91c6c1fc217 *man/make_sigma.Rd
fc1222fc0238be6bbf68137a67cc26d5 *man/make_state_matrix.Rd
e35af58dbf73a08dbe2a84912d056714 *man/plot_directed.Rd
bd3e19b4e79419810aa9b9371d45a811 *tests/testthat/Rplots.pdf
4feef9cb5687c914041ec9a147e548fe *tests/testthat/test_adjmatrix.R
33485aac3a58c9fcb8f6aa8bf18b98d9 *tests/testthat/test_commonlink.R
438f044eb2147ea56ca723a99626e178 *tests/testthat/test_distance.R
2962648b4583463cf4950782a12db3e5 *tests/testthat/test_generate.R
754469d630a6641b94fbc5eae5df6ed0 *tests/testthat/test_plot.R
31798dc41fd05d0f3b959379b3cb5aa2 *tests/testthat/test_sigma.R
1de41f992e635fc9d07466a5271eb266 *tests/testthat/test_state.R
6cbbe07fabdf35ca27a588768e8f840f *vignettes/plots_directed.Rmd
5faf16cb9c8c7f253414a8d2d98a0a2c *vignettes/plots_viral_quantitate.Rmd
f30cf79a2a0d8cc5f29fd40813f69a0e *vignettes/run_example_pathways.Rmd
e266dab0bad5c066f9ee7e6bb6d2cc27 *vignettes/test_graph_convergent.Rmd
c3e6a6658da15170be2d37a5a1051a21 *vignettes/test_graph_divergent.Rmd
1be2092295d9d28239ec0fe6d263ffa5 *vignettes/test_graph_network.Rmd
8b8d851cdbcba7cd03839bc4fa13a97c *vignettes/test_graph_network_inhibiting.Rmd
e0b83661fd6d64a43fe191feb9bb01db *vignettes/test_graph_network_large.html
e8313b80dd290a85341e8f113f717c04 *vignettes/test_graph_reconvergent.Rmd
