decb6382bd70fabfd4b9475ee305198c *ChangeLog
a52df357b458bf85e23bb0a84b9ca590 *DESCRIPTION
386395f19f6294df7f83f200a3301227 *NAMESPACE
0695d95ade702024b64f8bd1c983e3d1 *R/annotatedTreeReader.R
d606c1301a254c19d5302347a0b02686 *R/auxClasses.R
764015498b8e7e51d4c1735d5797ca2d *R/dna2uniqSequences.R
037fe236fb61100507ca09341acf586a *R/epibase.R
84d17dfe35a04861c5bead6c380c1b9f *R/generics.R
e38ab3737b83dfcba98ba683f134633b *R/get.incidence.R
26ca02862f80f365ac77d7f18ab9c1dd *R/make.attributes.R
0eda1b77762e80a4cd783c1fb37069ba *R/make.phylo.R
e8a0162f724ec009b18b4d2327ea54f7 *R/obkContacts.R
75bd426ac175e03aa078aa0743a976fc *R/obkData.R
1a326c0a1098b670eaeba6e19ef0beac *R/obkData_Accessors.R
6044562a1d3d7d2ed2103dd4aeb1cb64 *R/obkData_basics.R
a34cf3651144fdee12996b97359f794b *R/obkSequences.R
aabb9b83decb335addf307a6bf233436 *R/phylo2ggphy.R
c2c89c1322a546c250565154a825c21b *R/plot.R
c72bab8606e56e851566517f76120702 *R/plotGeo.R
887f1e91475818f7abb888a28ad3de67 *R/plotIndividualTimeline.R
ec8e1ceb672fe65fb05019ab741b7ad4 *R/plotggMST.R
7ff8d9498482abb7d4d5d43625d5488e *R/plotggphy.R
0987689445f8162e9c2da03433a81c4e *R/simuEpi.R
a891901f9fdf7c592cf900529f93bfb8 *R/subset.R
49bba3246fcdd5c48770804ad6d0f3c9 *R/uniqSequences.R
6fbfe5317d1596e8109e34fe0114012f *R/utils.R
35f0adc4c7e5a30faf15c62e7925a112 *R/zzz.R
e9808687b7a084c436f6a4f2857bc905 *data/FluH1N1pdm2009.RData
a45b73837e429d7b998354ad4d42a7ed *data/HorseFlu.RData
ea1fa1546af1f5dacfce86849b233aa0 *data/HorseFluRaw.RData
6aba3d5c992412d88fb4f844870d19a8 *data/ToyOutbreak.RData
e004366bb17e2d8dcb643d2298d3c94f *data/ToyOutbreakRaw.RData
5fd46a60ab9a6d631e821c559f25cefe *inst/doc/epibase.R
493bc910dce876a8f8ed9185a636c226 *inst/doc/epibase.Rnw
ce8a6aa88de40af61cdb0c3887b1778e *inst/doc/epibase.pdf
1470607bdf124ecb2a9737e6eff07ca8 *inst/files/BEAST-expl.nex
97ad0f41cba29af2dc18879341eb6dfa *man/FluH1N1pdm2009.Rd
657b5b2a94feea3299516e0c1d9b5f77 *man/HorseFlu.Rd
a294a52f8e31d68c5ebf1b7ec65e42e9 *man/HorseFluRaw.Rd
60e5ea76c7f26c63e0349510a1a94c54 *man/ToyOutbreak.Rd
e62d384db1f3eeab8ec67d4cec2883b5 *man/ToyOutbreakRaw.Rd
ac61c445d4b1833c2874a4f933233b87 *man/annotatedTreeReader.Rd
a855d71baa25c4ed7fd816f927d9b3c9 *man/auxClasses.Rd
fe7505c623ad4ba14e99aeee34ef39f8 *man/dna2uniqSequences.Rd
1a60323408124fcf265b8500699e9d53 *man/epibase.package.Rd
8e090c17fdd2fd7d1b0065fe6a786b65 *man/get.data.Rd
1f35bfec8d991e15780f7b92ffdd5160 *man/get.dates.Rd
aa800c2322be67d08fc307acc8c23d92 *man/get.individuals.Rd
3373beda0892ae4e5883d1d2e33885a0 *man/make.attributes.Rd
6b2d913154904e264b8d5f1687739587 *man/make.phylo.Rd
a9d1309cc5391955f78b62b4976c0ee8 *man/obkContacts.Rd
b09efe29a0cbdff9a44ebb76be3ed317 *man/obkData.Rd
0cf29cba8d6fb8bbdfcb3708b38344db *man/obkDataPlot.Rd
da7e4eb5c98f68d3464a98c4a905c712 *man/obkSequences.Rd
01caee3e5b631405ad752a7f89ef5dd0 *man/phylo2ggphy.Rd
2ab93d85684ddc463415391997840d87 *man/phylofromtranstree.Rd
d7ed6790669aef897a2b43f3f9360e38 *man/plotEpi.Rd
9f7c258f8b07862991e7b36aff10e660 *man/plotGeo.Rd
b23317e3f1a74f62f2810032985ca475 *man/plotIndividualTimeline.Rd
00f2f3fccb736d66b51b6327df7e15ea *man/plotggMST.Rd
597a9119977bff837fcafdef2bbab96d *man/plotggphy.Rd
a01be53e77d67ecf41a82189a8ea44ef *man/simuEpi.Rd
7dd0765a52cea6e1cb64c152afa079d0 *man/subset.Rd
2351185c150a7c2705a69705877ce8ff *man/uniqSequences.Rd
493bc910dce876a8f8ed9185a636c226 *vignettes/epibase.Rnw
