* using log directory 'd:/Rcompile/CRANpkg/local/4.4/StormR.Rcheck' * using R version 4.4.3 (2025-02-28 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.3.0 GNU Fortran (GCC) 13.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'StormR/DESCRIPTION' ... OK * this is package 'StormR' version '0.2.1' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'StormR' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s] OK * checking whether the package can be loaded with stated dependencies ... [0s] OK * checking whether the package can be unloaded cleanly ... [0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s] OK * checking whether the namespace can be unloaded cleanly ... [1s] OK * checking loading without being on the library search path ... [0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [10s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [2s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [220s] OK Running 'testthat.R' [220s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [568s] ERROR Error(s) in re-building vignettes: --- re-building 'Behaviour.Rmd' using rmarkdown --- finished re-building 'Behaviour.Rmd' --- re-building 'ExtractStorms.Rmd' using rmarkdown --- finished re-building 'ExtractStorms.Rmd' --- re-building 'Models.Rmd' using rmarkdown --- finished re-building 'Models.Rmd' --- re-building 'SpatialBehaviour.Rmd' using rmarkdown Quitting from SpatialBehaviour.Rmd:132-134 [unnamed-chunk-10] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `h()`: ! error in evaluating the argument 'x' in selecting a method for function 'ext': error in evaluating the argument 'x' in selecting a method for function 'project': [project] Cannot do this transformation --- Backtrace: ▆ 1. ├─StormR::plotBehaviour(st, ss$PAM_MSW, dynamicPlot = TRUE) 2. │ └─leaflet::addRasterImage(map, rasterProduct, colors = pal, opacity = 0.8) 3. │ └─leaflet:::addRasterImage_SpatRaster(...) 4. │ ├─terra::ext(...) 5. │ ├─terra::project(...) 6. │ ├─terra::project(...) 7. │ └─terra::project(...) 8. │ └─terra (local) .local(x, ...) 9. │ └─terra:::messages(x, "project") 10. │ └─terra:::error(f, x@pntr$getError()) 11. │ └─base::stop("[", f, "] ", emsg, ..., call. = FALSE) 12. ├─base::.handleSimpleError(...) 13. │ └─base (local) h(simpleError(msg, call)) 14. └─base::.handleSimpleError(...) 15. └─base (local) h(simpleError(msg, call)) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'SpatialBehaviour.Rmd' failed with diagnostics: error in evaluating the argument 'x' in selecting a method for function 'ext': error in evaluating the argument 'x' in selecting a method for function 'project': [project] Cannot do this transformation --- failed re-building 'SpatialBehaviour.Rmd' --- re-building 'TemporalBehaviour.Rmd' using rmarkdown --- finished re-building 'TemporalBehaviour.Rmd' SUMMARY: processing the following file failed: 'SpatialBehaviour.Rmd' Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [18s] OK * checking HTML version of manual ... [6s] OK * DONE Status: 1 ERROR