* using log directory 'd:/Rcompile/CRANpkg/local/4.4/PoweREST.Rcheck' * using R version 4.4.3 (2025-02-28 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.3.0 GNU Fortran (GCC) 13.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'PoweREST/DESCRIPTION' ... OK * this is package 'PoweREST' version '0.1.1' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'PoweREST' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [9s] OK * checking whether the package can be loaded with stated dependencies ... [8s] OK * checking whether the package can be unloaded cleanly ... [8s] OK * checking whether the namespace can be loaded with stated dependencies ... [8s] OK * checking whether the namespace can be unloaded cleanly ... [9s] OK * checking loading without being on the library search path ... [9s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [21s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [1s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [10s] ERROR Running examples in 'PoweREST-Ex.R' failed The error most likely occurred in: > ### Name: fit_XGBoost > ### Title: Fit with XGBoost > ### Aliases: fit_XGBoost > > ### ** Examples > > data(power_example) > # Fit the local power surface of avg_log2FC_abs between 1 and 2 > avg_log2FC_abs_1_2<-dplyr::filter(power_example,avg_log2FC_abs>1 & avg_log2FC_abs<2) > # Fit the model > bst<-fit_XGBoost(power_example$power,avg_log2FC=power_example$avg_log2FC_abs, + avg_PCT=power_example$mean_pct,replicates=power_example$sample_size) Warning in throw_err_or_depr_msg("Passed unrecognized parameters: ", paste(head(names_unrecognized), : Passed unrecognized parameters: max.depth, verbose. This warning will become an error in a future version. Warning in throw_err_or_depr_msg("Parameter '", match_old, "' has been renamed to '", : Parameter 'data' has been renamed to 'x'. This warning will become an error in a future version. Warning in throw_err_or_depr_msg("Parameter '", match_old, "' has been renamed to '", : Parameter 'eta' has been renamed to 'learning_rate'. This warning will become an error in a future version. Error in xgboost::xgboost(data = dtrain, max.depth = max.depth, eta = eta, : argument "y" is missing, with no default Calls: fit_XGBoost ... -> process.y.margin.and.objective -> NROW Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [12s] OK * checking PDF version of manual ... [22s] OK * checking HTML version of manual ... [2s] OK * DONE Status: 1 ERROR