* using log directory 'd:/Rcompile/CRANpkg/local/4.6/sarp.snowprofile.Rcheck' * using R Under development (unstable) (2025-12-06 r89118 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.3.0 GNU Fortran (GCC) 14.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'sarp.snowprofile/DESCRIPTION' ... OK * this is package 'sarp.snowprofile' version '1.3.2' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'sarp.snowprofile' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s] OK * checking whether the package can be loaded with stated dependencies ... [0s] OK * checking whether the package can be unloaded cleanly ... [1s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s] OK * checking whether the namespace can be unloaded cleanly ... [1s] OK * checking loading without being on the library search path ... [1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [9s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [1s] ERROR Running examples in 'sarp.snowprofile-Ex.R' failed The error most likely occurred in: > ### Name: export.snowprofileCsv > ### Title: Export or write a snowprofile object to a CSV table > ### Aliases: export.snowprofileCsv > > ### ** Examples > > > ## export an entire snowprofile object: > > export.snowprofileCsv(SPpairs$A_manual, filename = file.path(tempdir(), 'file.csv'), + export.all = TRUE) > > > ## export only the layer properties of a snowprofile object, > # and change the column order with few column names: > # All layer variables will be exported, but the three ones provided in 'variables' > # will be the first three columns of the csv table, and their column names will be changed > # accordingly. > > export.snowprofileCsv(SPpairs$A_manual, filename = file.path(tempdir(), 'file.csv'), + export.all = 'Layers', + variables = list(height = 'height_top', hardness = 'hardness', + gtype = 'gt1')) > > > ## export all layer properties of a snowprofile object plus the station ID: > > export.snowprofileCsv(SPpairs$A_manual, filename = file.path(tempdir(), 'file.csv'), + export.all = 'Layers', variables = list(station_id = 'station_id')) > > ## check the content of the exported csv file: > csv_content <- read.csv(file.path(tempdir(), 'file.csv')) > head(csv_content) station_id depth thickness height hardness gtype gsize_avg gsize_max lwc 1 niviz_station 250 10 10 5 MFcr 1.5 1.5 D 2 niviz_station 230 20 30 3 FC 2.0 2.0 D 3 niviz_station 220 10 40 5 MFcr 1.5 1.5 D 4 niviz_station 157 63 103 4 RG 0.3 0.3 D 5 niviz_station 155 5 105 2 SH 5.0 5.0 D 6 niviz_station 95 60 165 4 RG 0.3 0.3 D gtype_sec ddate 1 2 3 4 5 6 > > ## or re-import the csv file as snowprofile object: > csv_snowprofile <- snowprofileCsv(file.path(tempdir(), 'file.csv')) Error in r[i1] - r[if (lag < (len <- length(r))) -len:-(len - lag + 1L) else i0] : non-numeric argument to binary operator Calls: snowprofileCsv ... format_snowprofileLayers -> snowprofileLayers -> diff -> diff.default Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [2s] ERROR Error(s) in re-building vignettes: --- re-building 'sarp.snowprofile.Rmd' using rmarkdown Quitting from sarp.snowprofile.Rmd:45-47 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `r[i1] - r[if (lag < (len <- length(r))) -len:-(len - lag + 1L) else i0]`: ! non-numeric argument to binary operator --- Backtrace: ▆ 1. └─sarp.snowprofile::snowprofile(dropNAs = FALSE) 2. ├─base::colnames(layers) 3. │ └─base::is.data.frame(x) 4. └─sarp.snowprofile::snowprofileLayers(dropNAs = FALSE, validate = FALSE) 5. ├─base::diff(sapply(entries[!is.na(entries)], length)) 6. └─base::diff.default(sapply(entries[!is.na(entries)], length)) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'sarp.snowprofile.Rmd' failed with diagnostics: non-numeric argument to binary operator --- failed re-building 'sarp.snowprofile.Rmd' SUMMARY: processing the following file failed: 'sarp.snowprofile.Rmd' Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [22s] OK * checking HTML version of manual ... [14s] OK * DONE Status: 2 ERRORs