* using log directory 'd:/Rcompile/CRANpkg/local/4.4/raptr.Rcheck'
* using R version 4.4.3 (2025-02-28 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.3.0
    GNU Fortran (GCC) 13.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'raptr/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'raptr' version '1.0.1'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... NOTE
Package suggested but not available for checking: 'gurobi'
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'raptr' can be installed ... OK
* used C compiler: 'gcc.exe (GCC) 13.3.0'
* used C++ compiler: 'g++.exe (GCC) 13.3.0'
* checking installed package size ... NOTE
  installed size is  8.0Mb
  sub-directories of 1Mb or more:
    doc       1.7Mb
    extdata   4.1Mb
    libs      1.3Mb
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [10s] OK
* checking whether the package can be loaded with stated dependencies ... [10s] OK
* checking whether the package can be unloaded cleanly ... [9s] OK
* checking whether the namespace can be loaded with stated dependencies ... [10s] OK
* checking whether the namespace can be unloaded cleanly ... [9s] OK
* checking loading without being on the library search path ... [10s] OK
* checking whether startup messages can be suppressed ... [11s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [28s] OK
* checking Rd files ... [2s] OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... [10s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compiled code ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [23s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [29s] ERROR
  Running 'testthat.R' [28s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > # check if on Fedora
  > os_name <- utils::sessionInfo()$running
  > is_fedora <- TRUE
  > if (
  +   is.character(os_name) &&
  +   identical(length(os_name), 1L) &&
  +   all(!is.na(os_name))
  + ) {
  +   is_fedora <- any(grepl("fedora", tolower(os_name), fixed = TRUE))
  + }
  > 
  > # run tests (but not on Fedora systems)
  > if (isTRUE(is_fedora)) {
  +   message("skipping tests on Fedora system")
  + } else {
  +   ## load packages
  +   library(testthat)
  +   library(raptr)
  + 
  +   ## enable parallel testing
  +   Sys.unsetenv("R_TESTS")
  + 
  +   ## determine reporter
  +   if (identical(Sys.getenv("CI"), "true")) {
  +     reporter <- "progress"
  +   } else {
  +     reporter <- testthat::check_reporter()
  +   }
  + 
  +   ## run tests
  +   test_check("raptr", reporter = reporter)
  + }
  Loading required package: sf
  Linking to GEOS 3.13.0, GDAL 3.10.1, PROJ 9.5.1; sf_use_s2() is TRUE
  Loading required package: terra
  terra 1.8.86
  
  Attaching package: 'terra'
  
  The following objects are masked from 'package:testthat':
  
      compare, describe
  
  Saving _problems/test-10-RapData-42.R
  Saving _problems/test-13-rap-16.R
  Saving _problems/test-13-rap-56.R
  Saving _problems/test-13-rap-117.R
  [ FAIL 4 | WARN 6 | SKIP 22 | PASS 253 ]
  
  ══ Skipped tests (22) ══════════════════════════════════════════════════════════
  • On CRAN (4): 'test-01-rapr-internal-test.R:110:3',
    'test-01-rapr-internal-test.R:150:3', 'test-07-DemandPoints.R:56:3',
    'test-07-DemandPoints.R:79:3'
  • {gurobi} is not installed (18): 'test-11-RapUnsolved.R:5:3',
    'test-11-RapUnsolved.R:43:3', 'test-11-RapUnsolved.R:113:3',
    'test-11-RapUnsolved.R:131:3', 'test-11-RapUnsolved.R:153:3',
    'test-11-RapUnsolved.R:178:3', 'test-11-RapUnsolved.R:206:3',
    'test-11-RapUnsolved.R:258:3', 'test-11-RapUnsolved.R:311:3',
    'test-11-RapUnsolved.R:333:3', 'test-11-RapUnsolved.R:357:3',
    'test-11-RapUnsolved.R:382:3', 'test-11-RapUnsolved.R:407:3',
    'test-11-RapUnsolved.R:434:3', 'test-11-RapUnsolved.R:452:3',
    'test-11-RapUnsolved.R:493:3', 'test-13-rap.R:78:3', 'test-13-rap.R:138:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-10-RapData.R:40:3'): make.RapData (single species) ─────────────
  <Rcpp::exception/C++Error/error/condition>
  Error: OGRCreateCoordinateTransformation(): transformation not available
  Backtrace:
      ▆
   1. └─raptr::make.RapData(cs_pus[1:10, ], cs_spp[[1]], cs_space, include.geographic.space = TRUE) at test-10-RapData.R:40:3
   2.   ├─sf::st_transform(projPolygons, sf::st_crs(species))
   3.   └─sf:::st_transform.sf(projPolygons, sf::st_crs(species))
   4.     ├─sf::st_transform(st_geometry(x), crs, ...)
   5.     └─sf:::st_transform.sfc(st_geometry(x), crs, ...)
   6.       ├─sf::st_sfc(...)
   7.       ├─base::structure(...)
   8.       └─sf:::CPL_transform(...)
  ── Error ('test-13-rap.R:7:3'): rap (unreliable - default RapOpts and GurobiOpts - solve=FALSE) ──
  <Rcpp::exception/C++Error/error/condition>
  Error: OGRCreateCoordinateTransformation(): transformation not available
  Backtrace:
       ▆
    1. └─raptr::rap(...) at test-13-rap.R:7:3
    2.   ├─raptr::RapUnsolved(...)
    3.   │ └─methods::new("RapUnsolved", opts = opts, data = data)
    4.   │   ├─methods::initialize(value, ...)
    5.   │   └─methods::initialize(value, ...)
    6.   ├─base::do.call(...)
    7.   └─raptr (local) `<fn>`(...)
    8.     ├─sf::st_transform(projPolygons, sf::st_crs(species))
    9.     └─sf:::st_transform.sf(projPolygons, sf::st_crs(species))
   10.       ├─sf::st_transform(st_geometry(x), crs, ...)
   11.       └─sf:::st_transform.sfc(st_geometry(x), crs, ...)
   12.         ├─sf::st_sfc(...)
   13.         ├─base::structure(...)
   14.         └─sf:::CPL_transform(...)
  ── Error ('test-13-rap.R:45:3'): rap (unreliable - default RapOpts and GurobiOpts and sparse occupancy - solve=FALSE) ──
  <Rcpp::exception/C++Error/error/condition>
  Error: OGRCreateCoordinateTransformation(): transformation not available
  Backtrace:
       ▆
    1. └─raptr::rap(...) at test-13-rap.R:45:3
    2.   ├─raptr::RapUnsolved(...)
    3.   │ └─methods::new("RapUnsolved", opts = opts, data = data)
    4.   │   ├─methods::initialize(value, ...)
    5.   │   └─methods::initialize(value, ...)
    6.   ├─base::do.call(...)
    7.   └─raptr (local) `<fn>`(...)
    8.     ├─sf::st_transform(projPolygons, sf::st_crs(species))
    9.     └─sf:::st_transform.sf(projPolygons, sf::st_crs(species))
   10.       ├─sf::st_transform(st_geometry(x), crs, ...)
   11.       └─sf:::st_transform.sfc(st_geometry(x), crs, ...)
   12.         ├─sf::st_sfc(...)
   13.         ├─base::structure(...)
   14.         └─sf:::CPL_transform(...)
  ── Error ('test-13-rap.R:107:3'): rap (reliable - default RapOpts and GurobiOpts - solve=FALSE) ──
  <Rcpp::exception/C++Error/error/condition>
  Error: OGRCreateCoordinateTransformation(): transformation not available
  Backtrace:
       ▆
    1. └─raptr::rap(...) at test-13-rap.R:107:3
    2.   ├─raptr::RapUnsolved(...)
    3.   │ └─methods::new("RapUnsolved", opts = opts, data = data)
    4.   │   ├─methods::initialize(value, ...)
    5.   │   └─methods::initialize(value, ...)
    6.   ├─base::do.call(...)
    7.   └─raptr (local) `<fn>`(...)
    8.     ├─sf::st_transform(projPolygons, sf::st_crs(species))
    9.     └─sf:::st_transform.sf(projPolygons, sf::st_crs(species))
   10.       ├─sf::st_transform(st_geometry(x), crs, ...)
   11.       └─sf:::st_transform.sfc(st_geometry(x), crs, ...)
   12.         ├─sf::st_sfc(...)
   13.         ├─base::structure(...)
   14.         └─sf:::CPL_transform(...)
  
  [ FAIL 4 | WARN 6 | SKIP 22 | PASS 253 ]
  Error:
  ! Test failures.
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [6s] OK
* checking PDF version of manual ... [27s] OK
* checking HTML version of manual ... [14s] OK
* DONE
Status: 1 ERROR, 2 NOTEs