752d022f69b707d1de9da0a1ba5a98a9 *CITATION
05640539a7307a3928be2d35199aa9e7 *DESCRIPTION
9ac711beab0cc8e42628244da82efe23 *INDEX
61929ba2a6b83db76e4a07a97f76acd9 *LICENSE
40827bbf9b9f82c4be8778803ed00477 *Meta/Rd.rds
9376e5650c6c68cc9a8b6533eb4d8dd6 *Meta/data.rds
9f7a4637f056aa0787fb29bc9c21a1ff *Meta/features.rds
f839cc5ddab7d31cafbbca0e13bfbbff *Meta/hsearch.rds
5285362d0538c5023e39575f0f3cd805 *Meta/links.rds
7c39783878976171f183d99b943dbf4e *Meta/nsInfo.rds
f3cf52be4e25281d32718df9133e7ba7 *Meta/package.rds
12e263b9ad3ca89e8d2ebb2d76ffc601 *Meta/vignette.rds
1ebac0f2b642d58842414fbc93774dbb *NAMESPACE
b0f4158a40b287bc518c1a2703df48b8 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/aphylo
7424d4eee4a20017bcc1b127f6f3d979 *R/aphylo.rdb
7a9634e49141bbf141f768d6695ed7f0 *R/aphylo.rdx
ddfc4e64baef005c0ab224861b25f3de *data/Rdata.rdb
ca873a19eb3166ace7ffd18af05b5cf5 *data/Rdata.rds
d4476faa616b56cc19fee60f5f67a223 *data/Rdata.rdx
1aec114435d8e32226d635f248870fef *doc/example.R
f6dd5418c6c3dd63b48f2dfabf7289f1 *doc/example.Rmd
824f2bc4cd774c2b3c50eae183aafc51 *doc/example.html
556fb08da76c6524b2a705863b796b54 *doc/index.html
7836c4cfc00134c9db3af7a677155f74 *help/AnIndex
b8b3829bc682dfc24bd9aacee8d57851 *help/aliases.rds
7723aca2050f9b8da33f79229bc0af51 *help/aphylo.rdb
75079447fd23814ff00604332284e0a3 *help/aphylo.rdx
15106ae19d7bab49946b4fb86ab67b84 *help/figures/MCMC-1.png
3f23c619b67684a16e3d3594c3b16381 *help/figures/MCMC-2.png
29f2278204a8e9b90fffc135fce78803 *help/figures/MLE-1.png
f2e4adde9c49ac463ef11063c342c818 *help/figures/Predict-1.png
cee2ef3b949c3dde715337bd95022f37 *help/figures/get-offspring-1.png
b9363067213fa141c71346cf4607a72e *help/figures/get-offspring-2.png
70397dca0edbfe3d050b0b710d1fbfb2 *help/figures/logo-raw.svg
2f515d48459019d3659dafd617405379 *help/figures/logo.svg
7eed15297fd37fc983a63866a3a94c65 *help/paths.rds
ff54ae7c03f632fe38434de54b303f07 *html/00Index.html
3845aef6126cf18c45937f292f23508c *html/R.css
4c7e705a7eaaeabe9a5798438f7d2c4c *include/pruner.hpp
5be43a2820027dce523932d26c2861b6 *include/tree_bones.hpp
15ec53edc2a783eba98f0e4a0fa6998d *include/tree_meat.hpp
e71ed660c8b5bab2a461ef08345fd406 *include/treeiterator_bones.hpp
c35672d8d32d75d76cde603aada6d51c *include/treeiterator_meat.hpp
84442a3c857b303086a2a2c2cb715e65 *include/typedefs.hpp
b0099c8528de2230f73d297c6525d798 *libs/x64/aphylo.dll
f88da8e5e5767cc2385733951745b741 *libs/x64/symbols.rds
fa664027e38dfa80e10a2536c160e69e *tinytest/test-aphylo-ape-info.r
365d0fae89c28ad8b83791d0fc17f052 *tinytest/test-aphylo_from_data_frame.R
6f7ba4f78b31fef45249a1a47d03d340 *tinytest/test-auc.r
892ed1ed4a41f722ea8ea7e8a68925ce *tinytest/test-balance.r
a5419130e01f04a7a1770c981beb8ffc *tinytest/test-cv.R
70ad785d36cf57dc2eedd1e6b0224fe0 *tinytest/test-data-management.r
b4b4300f84f0e39ddeaefbb30a4ae50f *tinytest/test-formula.r
e905d7e30320448ffd7733c497e9b362 *tinytest/test-impute_duplications.R
3d892050b843dd690746e938e4b6a300 *tinytest/test-indexing.R
7a2b3b9ab7cd13afb0b496510e918ffb *tinytest/test-loglikelihood.r
044a64c2221b7db5cb9ece2a9e6e4a3b *tinytest/test-panther.r
b93822127595226990247b74d5956e35 *tinytest/test-parameter-estimates-and-formulas.r
102efa5da1f02e6b04e095a888f4e314 *tinytest/test-parameter-estimates.r
212518863a09e761b0760f7a45919e59 *tinytest/test-plot_loglike.r
8314b8f50a3f5d2f381d41e73d128957 *tinytest/test-predict-ans0.rds
eee3fc94af26e42df3b49cea36953e90 *tinytest/test-predict-ans1.rds
f70bef618daee796fb49efcbc45ec00a *tinytest/test-predict.r
7685d89dd1d1b44554e7d9b8aec329f0 *tinytest/test-pseq-reduce.r
40c264e9b1d57096ee3dc221ee1b49e6 *tinytest/test-sim_phylo.r
a6795005414fbb399799b83a408d4d6a *tree.tree
