acebc237c52e1b8dc71fd6622cc75444 *CITATION
144c56ca5cf1c63444f4aff87f167237 *DESCRIPTION
2be43d5dad2b4d4bfeb046c943de888e *INDEX
512a94c82c1aaf78d2c78cc12b548721 *Meta/Rd.rds
4d1492de7968466564e971368d24d147 *Meta/features.rds
b1cb164143ba2c75c01d371bcadde767 *Meta/hsearch.rds
b965e0dbe67d5fe1cf13bd7db0cdddd3 *Meta/links.rds
056b0aae09684502680c797d6a29559f *Meta/nsInfo.rds
b6f69933a998ee2a338d836088fe5a33 *Meta/package.rds
2dfa0d4f8b9071f8645971771cc2b212 *NAMESPACE
7a4c04a131313eb5b77a36c69a17806f *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/aroma.cn
8a49c652f4f7e5eac5f7b1e98967cdfb *R/aroma.cn.rdb
3a109012ddc0cf8a92c4565ae5d0a0e4 *R/aroma.cn.rdx
42ebecde7fbd301fdb5ff5ebc4aa18e9 *help/AnIndex
b333d230c5cf2684caf801f211c770eb *help/aliases.rds
824db8af6cf2322466f33bc8e21c2630 *help/aroma.cn.rdb
1f05ef35139b2e67bc7446e658c5bb3a *help/aroma.cn.rdx
44d32e635878d544591b81bdd871f49d *help/paths.rds
75444edfb4d447cfa945330f094c72b1 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
c1c1b071c902ad6ab220f79a3178888c *templates/rsp/PairedPSCBS,deShear,report.tex.rsp
f01bbc88ade170e0dcb4c76fac17fe7d *templates/rsp/bioinformatics-journals-abbr.bib
f3907cf5bef1f44c8c15558e94274a18 *templates/rsp/natbib.bst
f690ef923e880968c45b6debb29ea434 *testScripts/devel/C1C2/21.PairedPSCBS,deShear,report.R
0618e2db8237982057da9cf4fbeaf2fb *testScripts/devel/C1C2/31.PairedPSCBS,DP,deShear.R
f810297ab7440a112afb3bdc43ec5d0f *testScripts/setup/01a.downloadAllAnnotationData.R
5f05ccdf45a5febf8b00eb45e9283ffb *testScripts/setup/01b.downloadAllRawDataSet.R
9654d2efda9ee39dc5ff6550d82f18dc *testScripts/setup/01c.installAllPackages.R
271dfddaddc96369d8adbb5e754afa2a *testScripts/setup/99a.cleanupRootDirectories.R
587b454a0475abb90c181ac01cad519b *testScripts/setup/spawnTests.sh
0ef29c99d7c3ba6106d41a297db530d7 *testScripts/system/CondSegmentation/test20090927,TBN,plot.Rex
93a1d82c25edb670e5905cd01cb7403a *testScripts/system/CondSegmentation/test20091014,TBN,plot.Rex
e9a432b7306cb17e24ac48977926d63b *testScripts/system/CopyNumberProfiles/20100909a,findAtomicAberrations.Rex
af6eeccdbb067ebada5832b7f24a883b *testScripts/system/CopyNumberProfiles/20100909b,NormalContamination.Rex
63c081b74fc801964724d0242a39c68f *testScripts/system/CopyNumberProfiles/20100911a,TumorClonality.Rex
4bd04f54c80535e83b86856fe8fa6ea5 *testScripts/system/CopyNumberProfiles/20100911b,TumorClonality,lineage.Rex
d0a1d14e4121abf78de114ecd663041f *testScripts/system/CopyNumberProfiles/20100912a,SegmentationStdError.Rex
d863e583331b3d10c3413d06af21539d *testScripts/system/CopyNumberProfiles/20100912b,Saturation.Rex
ca955d2b1405e8849bebb081e67c3caa *testScripts/system/CurveNormalization,OV/test20090715a,waves.Rex
be60e6457577af5349e3346e4505f93b *testScripts/system/MSLHN/20091218,TCGA,MSLHCN.Rex
753590f4e944f639b8a9e2109e301175 *testScripts/system/MultiPlatform/test20090208,TCGA,MSCN.Rex
776743b5d701792443825fe7dfedbaf5 *testScripts/system/MultiPlatform/test20090209,TCGA,plot.Rex
0b1889427ebbce449b9eccca850587ad *testScripts/system/MultiPlatform/test20090210,TCGA,MSCN,plot.Rex
144ae249c2aa7209cc653594313f3286 *testScripts/system/MultiPlatform/test20090512,TCGA,MSCN,shifts.Rex
1c52de59c6c78c8a6da9a0696bc04fb5 *testScripts/system/MultiPlatform/test20090512,TCGA,MSCN,wCBS.Rex
7aad51dc324e8277edd754fd197dc1e6 *testScripts/system/MultiPlatform/test20090512,TCGA,MSCN,weights.Rex
4e67f71ce6bf8a4c5378e9856a28d4d1 *testScripts/system/MultiPlatform/test20090720,TCGA,MSCN,tracks.Rex
ef33bbc64582d040d7271a23f3bcf414 *testScripts/system/MultiPlatform/test20100102,TCGA,MSCN,mpCBS.Rex
57960543afcf9532e03a9375f437371a *testScripts/system/TumorBoost/test20090429a,NGC.Rex
a67f70ddefe502be88ed003d3913adf8 *testScripts/system/TumorBoost/test20090429b,TBN.Rex
32f4129918232454cafe62afd554dddb *testScripts/system/TumorBoost/test20090429c,TBN,plot.Rex
31f51ad554b5c397ea7c079f24d1d18f *testScripts/system/TumorBoost/test20090429d,TBN,LOH,plot.Rex
81270117561989d22eb5450574e99694 *testScripts/system/TumorBoost/test20090620a,NGC.Rex
dd4cc569e94c9529b92b51a99ef77cfd *testScripts/system/chipTypes/GenomeWideSNP_6/calibrateC1C2,20111026.Rex
290156b8f02f00de6cc2dd651cd9c194 *testScripts/system/chipTypes/GenomeWideSNP_6/calibrateC1C2.PairedPSCBS.Rex
5bca8b5b48b0763455917047ca5e38b2 *testScripts/system/chipTypes/GenomeWideSNP_6/deShearC1C2.PairedPSCBS.Rex
a493230cf30b4c955fc69d1a58fba954 *testScripts/system/chipTypes/GenomeWideSNP_6/normalizeLoess2D.PairedPSCBS.Rex
674117c714550115376c102c2f5f8743 *testScripts/system/chipTypes/GenomeWideSNP_6/orthogonalizeC1C2.PairedPSCBS.Rex
63b25bfcba3550e2df64a0ef3528449e *testScripts/system/pairedPSCN/R/00.setup.R
c11627802fe64d57a0d320b2fd322529 *testScripts/system/pairedPSCN/R/getTumorNormalPairs.R
84f679b47dee01c4730af524b702c1fb *testScripts/system/pairedPSCN/R/loadAllDataSets.R
8886c91c0fd41c00562723fd5a41a345 *testScripts/system/pairedPSCN/R/zzz.R
f2cc2de4caf80b45454e7139afeba40d *testScripts/system/pairedPSCN/genomicPlots.tex.rsp
6e62c70a93c2c479bbdea25a574c4471 *testScripts/system/segmentation/20091110,CBS.Rex
4837bfe401cf690d9429a35a49dc789f *testScripts/system/tracks/20091008,HCC1143,CRMAv2-dChip-GTC,plot.Rex
9fd3e093be33d76a2694c9ecf40873e4 *testScripts/system/tracks/20091010,TCGA,plot.Rex
f02e385e97eceb7e95013040d151e6cd *testScripts/system/tracks/utils.R
