Last updated on 2026-01-19 07:51:50 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.42 | 255.72 | 269.14 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.03 | 238.46 | 249.49 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 29.00 | 323.15 | 352.15 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 30.00 | 416.93 | 446.93 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 195.00 | 215.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.45 | 276.00 | 291.45 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.99 | 270.09 | 284.08 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 214.00 | 224.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 200.00 | 222.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 214.00 | 224.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 243.00 | 267.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [101s/171s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.541, system: 0.044, elapsed: 2.520 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.548, system: 0.096, elapsed: 13.803 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.015, elapsed: 0.909 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.595, system: 0.629, elapsed: 22.694 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.003, elapsed: 0.185 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.636, system: 0.808, elapsed: 40.984 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.609, system: 0.046, elapsed: 2.273 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.575, system: 0.132, elapsed: 12.660 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.015, elapsed: 0.425 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.937, system: 0.689, elapsed: 10.822 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.003, elapsed: 0.179 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.123, system: 0.910, elapsed: 27.134 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.637, system: 0.048, elapsed: 2.101 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.587, system: 0.084, elapsed: 21.680 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.314, system: 0.015, elapsed: 1.261 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.781, system: 0.693, elapsed: 31.647 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.011, elapsed: 0.284 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.265, system: 0.354, elapsed: 1.097 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.484, system: 1.248, elapsed: 59.041 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.701, system: 0.060, elapsed: 2.093 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.596, system: 0.124, elapsed: 11.852 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.359, system: 0.031, elapsed: 0.215 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 9.029, system: 0.967, elapsed: 7.965 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.003, elapsed: 0.215 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.199, system: 0.559, elapsed: 13.274 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 32.862, system: 1.785, elapsed: 36.511 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/151s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.635, system: 0.065, elapsed: 3.264 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.584, system: 0.111, elapsed: 17.312 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.017, elapsed: 0.341 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.202, system: 0.417, elapsed: 8.162 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.003, elapsed: 0.283 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.365, system: 0.637, elapsed: 30.485 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.593, system: 0.038, elapsed: 2.478 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.557, system: 0.055, elapsed: 16.999 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.014, elapsed: 0.516 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.222, system: 0.386, elapsed: 7.534 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.003, elapsed: 0.248 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.307, system: 0.517, elapsed: 28.852 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.577, system: 0.029, elapsed: 2.300 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.609, system: 0.062, elapsed: 15.300 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.013, elapsed: 0.291 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.385, system: 0.397, elapsed: 6.876 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.004, elapsed: 0.326 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.200, system: 0.303, elapsed: 1.394 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.817, system: 0.827, elapsed: 27.504 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.608, system: 0.034, elapsed: 3.000 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.449, system: 0.055, elapsed: 24.429 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.013, elapsed: 0.512 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.303, system: 0.396, elapsed: 7.710 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.003, elapsed: 0.299 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.866, system: 0.538, elapsed: 17.412 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.264, system: 1.060, elapsed: 54.733 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64